RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
TTC28-207ENST00000490475 TRIM17Q9Y577 477 aa12.84□□□□□ -0.35
TTC28-207ENST00000490475 AOX1Q06278 1338 aa12.84□□□□□ -0.35
TTC28-207ENST00000490475 AK9Q5TCS8 1911 aa12.84□□□□□ -0.35
TTC28-207ENST00000490475 CCL15-CCL14A0A0B4J2E2 113 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 CRHR2Q13324 411 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
TTC28-207ENST00000490475 CCL15Q16663 113 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
TTC28-207ENST00000490475 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 ZNF341Q9BYN7 854 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 EFCC1Q9HA90 598 aa12.83□□□□□ -0.36
TTC28-207ENST00000490475 PDS5AQ29RF7 1337 aaKnown RBP12.83□□□□□ -0.36
TTC28-207ENST00000490475 GNRH1P01148 92 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 GJA5P36382 358 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 PPATQ06203 517 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 KIF22Q14807 665 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 MEIS3Q99687 375 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 SIL1Q9H173 461 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 R3HDMLQ9H3Y0 253 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
TTC28-207ENST00000490475 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
TTC28-207ENST00000490475 RLBP1P12271 317 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 PPIL2Q13356 520 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 MTX1Q13505 466 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
TTC28-207ENST00000490475 GRIK5Q16478 980 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 PTPN18Q99952 460 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 PTPN22Q9Y2R2 807 aa12.81□□□□□ -0.36
TTC28-207ENST00000490475 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
TTC28-207ENST00000490475 CACNB3P54284 484 aa12.8□□□□□ -0.36
TTC28-207ENST00000490475 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
TTC28-207ENST00000490475 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
TTC28-207ENST00000490475 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
TTC28-207ENST00000490475 SNCAIPQ9Y6H5 919 aa12.8□□□□□ -0.36
TTC28-207ENST00000490475 KIAA0100Q14667 2235 aaKnown RBP12.79□□□□□ -0.36
TTC28-207ENST00000490475 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 TLR2O60603 784 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 ENTPD3O75355 529 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 PRDX5P30044 214 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 PRMT2P55345 433 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 CCDC102BQ68D86 513 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
TTC28-207ENST00000490475 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
TTC28-207ENST00000490475 CD99L2Q8TCZ2 262 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
TTC28-207ENST00000490475 ZNF112Q9UJU3 913 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
TTC28-207ENST00000490475 TNRC18O15417 2968 aaPredicted RBP12.78□□□□□ -0.36
TTC28-207ENST00000490475 IRF6O14896 467 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 IGSF3O75054 1194 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 GNAI2P04899 355 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 PHKA1P46020 1223 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 NOL9Q5SY16 702 aaKnown RBP12.78□□□□□ -0.36
TTC28-207ENST00000490475 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 ARMC5Q96C12 935 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 IDI2Q9BXS1 227 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
TTC28-207ENST00000490475 RBBP6Q7Z6E9 1792 aaKnown RBP12.77□□□□□ -0.36
TTC28-207ENST00000490475 A0A1B0GUL7 405 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 SLC34A2O95436 690 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 LDHCP07864 332 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 GSTO1P78417 241 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 DIXDC1Q155Q3 683 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 GORABQ5T7V8 394 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
TTC28-207ENST00000490475 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 PA2G4Q9UQ80 394 aaKnown RBP12.77□□□□□ -0.37
TTC28-207ENST00000490475 GAKO14976 1311 aa12.77□□□□□ -0.37
TTC28-207ENST00000490475 CXCL11O14625 94 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 ZBTB7BO15156 539 aaPredicted RBP12.76□□□□□ -0.37
TTC28-207ENST00000490475 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
TTC28-207ENST00000490475 HOXD10P28358 340 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 TCP10Q12799 353 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
TTC28-207ENST00000490475 RASGRF1Q13972 1273 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 SLC9C1Q4G0N8 1177 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 GCC1Q96CN9 775 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 PICK1Q9NRD5 415 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 ABCF2Q9UG63 623 aa12.76□□□□□ -0.37
TTC28-207ENST00000490475 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
TTC28-207ENST00000490475 UQCRFS1P1P0C7P4 283 aa12.75□□□□□ -0.37
TTC28-207ENST00000490475 TIMM10P62072 90 aa12.75□□□□□ -0.37
TTC28-207ENST00000490475 LACTBP83111 547 aaPredicted RBP12.75□□□□□ -0.37
TTC28-207ENST00000490475 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms