RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 CLMNQ96JQ2 1002 aa14.05□□□□□ -0.16
CDCP1-203ENST00000490471 ZNF341Q9BYN7 854 aa14.05□□□□□ -0.16
CDCP1-203ENST00000490471 ZCCHC17Q9NP64 241 aaKnown RBP14.05□□□□□ -0.16
CDCP1-203ENST00000490471 COPRSQ9NQ92 184 aa14.05□□□□□ -0.16
CDCP1-203ENST00000490471 PCDHAC2Q9Y5I4 1007 aa14.05□□□□□ -0.16
CDCP1-203ENST00000490471 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
CDCP1-203ENST00000490471 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
CDCP1-203ENST00000490471 RARSP54136 660 aaKnown RBP14.04□□□□□ -0.16
CDCP1-203ENST00000490471 SP3Q02447 781 aa14.04□□□□□ -0.16
CDCP1-203ENST00000490471 MVPQ14764 893 aaKnown RBP14.04□□□□□ -0.16
CDCP1-203ENST00000490471 FAM151AQ8WW52 585 aa14.04□□□□□ -0.16
CDCP1-203ENST00000490471 TMEM39BQ9GZU3 492 aa14.04□□□□□ -0.16
CDCP1-203ENST00000490471 TRIM17Q9Y577 477 aa14.04□□□□□ -0.16
CDCP1-203ENST00000490471 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
CDCP1-203ENST00000490471 MYH13Q9UKX3 1938 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 SRGAP3O43295 1099 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 LDHCP07864 332 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDCP1-203ENST00000490471 SNAPC2Q13487 334 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 TAF1CQ15572 869 aaPredicted RBP14.03□□□□□ -0.16
CDCP1-203ENST00000490471 NBPF11Q86T75 865 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 DZIP1Q86YF9 867 aaKnown RBP14.03□□□□□ -0.16
CDCP1-203ENST00000490471 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDCP1-203ENST00000490471 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 WRNIP1Q96S55 665 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 FZD1Q9UP38 647 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 SALL1Q9NSC2 1324 aa14.03□□□□□ -0.16
CDCP1-203ENST00000490471 RPAP1Q9BWH6 1393 aaPredicted RBP14.03□□□□□ -0.16
CDCP1-203ENST00000490471 CCL15-CCL14A0A0B4J2E2 113 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 GNAI2P04899 355 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 GSTO1P78417 241 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 VGLL4Q14135 290 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 CCL15Q16663 113 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 ATG9AQ7Z3C6 839 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.17
CDCP1-203ENST00000490471 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 EFCC1Q9HA90 598 aa14.02□□□□□ -0.17
CDCP1-203ENST00000490471 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
CDCP1-203ENST00000490471 SPDYE5A6NIY4 337 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 MAP4K4O95819 1239 aaPredicted RBP14.01□□□□□ -0.17
CDCP1-203ENST00000490471 GNRH1P01148 92 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 SOX10P56693 466 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 PPATQ06203 517 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 APOBEC3HQ6NTF7 200 aaKnown RBP14.01□□□□□ -0.17
CDCP1-203ENST00000490471 ATF7IPQ6VMQ6 1270 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.01□□□□□ -0.17
CDCP1-203ENST00000490471 NEUROD6Q96NK8 337 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
CDCP1-203ENST00000490471 USP40Q9NVE5 1235 aa14.01□□□□□ -0.17
CDCP1-203ENST00000490471 SSC5DA1L4H1 1573 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
CDCP1-203ENST00000490471 CRHR2Q13324 411 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 PPIL2Q13356 520 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 CCDC102BQ68D86 513 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 ZSCAN29Q8IWY8 852 aaPredicted RBP14□□□□□ -0.17
CDCP1-203ENST00000490471 TMEM106CQ9BVX2 250 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 ABCF2Q9UG63 623 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 AK9Q5TCS8 1911 aa14□□□□□ -0.17
CDCP1-203ENST00000490471 IGSF3O75054 1194 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 ENTPD3O75355 529 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 UQCRFS1P1P0C7P4 283 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 HOXD10P28358 340 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 CACNB3P54284 484 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 PRMT2P55345 433 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 MTX1Q13505 466 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 MEIS3Q99687 375 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 DAGLAQ9Y4D2 1042 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 LAMB1P07942 1786 aa13.99□□□□□ -0.17
CDCP1-203ENST00000490471 PCNTO95613 3336 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 A0A1B0GUL7 405 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 MS4A1P11836 297 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 TCP10Q12799 353 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 OS9Q13438 667 aaPredicted RBP13.98□□□□□ -0.17
CDCP1-203ENST00000490471 GRIK5Q16478 980 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 OTOP1Q7RTM1 612 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
CDCP1-203ENST00000490471 MS4A4AQ96JQ5 239 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 PICK1Q9NRD5 415 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 PTPN22Q9Y2R2 807 aa13.98□□□□□ -0.17
CDCP1-203ENST00000490471 AOX1Q06278 1338 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 PRDX5P30044 214 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 PHKA1P46020 1223 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 TIMM10P62072 90 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 CCDC158Q5M9N0 1113 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 MIGA2Q7L4E1 593 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 CD99L2Q8TCZ2 262 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
CDCP1-203ENST00000490471 XAGE2Q96GT9 111 aa13.97□□□□□ -0.17
CDCP1-203ENST00000490471 PA2G4Q9UQ80 394 aaKnown RBP13.97□□□□□ -0.17
CDCP1-203ENST00000490471 CXCL11O14625 94 aa13.96□□□□□ -0.17
CDCP1-203ENST00000490471 TLR2O60603 784 aa13.96□□□□□ -0.17
CDCP1-203ENST00000490471 GJA5P36382 358 aa13.96□□□□□ -0.17
CDCP1-203ENST00000490471 TFCP2Q12800 502 aa13.96□□□□□ -0.17
CDCP1-203ENST00000490471 FASTKD5Q7L8L6 764 aaKnown RBP13.96□□□□□ -0.17
CDCP1-203ENST00000490471 BRI3BPQ8WY22 251 aa13.96□□□□□ -0.17
CDCP1-203ENST00000490471 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.17
CDCP1-203ENST00000490471 IDI2Q9BXS1 227 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms