RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 UNCXA6NJT0 531 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 SASH1O94885 1247 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 OTUD7BQ6GQQ9 843 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 ANKLE1Q8NAG6 615 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 MXD3Q9BW11 206 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 ARHGAP39Q9C0H5 1083 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 STAP2Q9UGK3 403 aa9.45□□□□□ -0.9
PDLIM1-203ENST00000490391 DNAH12Q6ZR08 3092 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 TNFRSF10AO00220 468 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 ANXA1P04083 346 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 GJA8P48165 433 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 RPS8P62241 208 aaKnown RBP9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 ARHGEF6Q15052 776 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 DACT2Q5SW24 774 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 PODNQ7Z5L7 613 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 GDF15Q99988 308 aa9.44□□□□□ -0.9
PDLIM1-203ENST00000490391 GJB1P08034 283 aa9.43□□□□□ -0.9
PDLIM1-203ENST00000490391 LRIT3Q3SXY7 679 aa9.43□□□□□ -0.9
PDLIM1-203ENST00000490391 BRI3BPQ8WY22 251 aa9.43□□□□□ -0.9
PDLIM1-203ENST00000490391 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
PDLIM1-203ENST00000490391 GGA1Q9UJY5 639 aa9.43□□□□□ -0.9
PDLIM1-203ENST00000490391 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
PDLIM1-203ENST00000490391 HSPA5P11021 654 aaKnown RBP9.42□□□□□ -0.9
PDLIM1-203ENST00000490391 BMP8BP34820 402 aa9.42□□□□□ -0.9
PDLIM1-203ENST00000490391 NFX1Q12986 1120 aaKnown RBP9.42□□□□□ -0.9
PDLIM1-203ENST00000490391 DEFB129Q9H1M3 183 aa9.42□□□□□ -0.9
PDLIM1-203ENST00000490391 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1-203ENST00000490391 ECM29Q5VYK3 1845 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 FARP2O94887 1054 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 TAF1CQ15572 869 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 CC2D1BQ5T0F9 858 aaKnown RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 SWT1Q5T5J6 900 aaKnown RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 COPS6Q7L5N1 327 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 ZFYVE28Q9HCC9 887 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 SEC31BQ9NQW1 1179 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 ANKIB1Q9P2G1 1089 aa9.41□□□□□ -0.9
PDLIM1-203ENST00000490391 MYO3BQ8WXR4 1341 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 USP2O75604 605 aaPredicted RBP9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 GNRH1P01148 92 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 CCL5P13501 91 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 CTGFP29279 349 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 PRMT2P55345 433 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 XAGE3Q8WTP9 111 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 ISCA1Q9BUE6 129 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
PDLIM1-203ENST00000490391 MED23Q9ULK4 1368 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 XDHP47989 1333 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 RPTORQ8N122 1335 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 TLR2O60603 784 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 MMP14P50281 582 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 STRIP1Q5VSL9 837 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 ANKRD13AQ8IZ07 590 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 U2AF1L4Q8WU68 220 aaKnown RBP9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 OPTNQ96CV9 577 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 GUCD1Q96NT3 240 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 PRR14Q9BWN1 585 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 RAPGEFL1Q9UHV5 662 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
PDLIM1-203ENST00000490391 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 CCL15-CCL14A0A0B4J2E2 113 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 GRK4P32298 578 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 CCL15Q16663 113 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 NBPF12Q5TAG4 269 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 RNF208Q9H0X6 261 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 ELP3Q9H9T3 547 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 DACH1Q9UI36 760 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 RIPOR2Q9Y4F9 1068 aa9.38□□□□□ -0.91
PDLIM1-203ENST00000490391 AOX1Q06278 1338 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 EIF2S2P20042 333 aaKnown RBP9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 PLA2G5P39877 138 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 KIAA0825Q8IV33 1275 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 TDHQ8IZJ6 230 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 PCDHAC2Q9Y5I4 1007 aa9.37□□□□□ -0.91
PDLIM1-203ENST00000490391 COL2A1P02458 1487 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms