RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
TMEM39A-210ENST00000490099 RPAP1Q9BWH6 1393 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 LAMB1P07942 1786 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 A0A1B0GUL7 405 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 GPR25O00155 361 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 PRDX5P30044 214 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 CACNB3P54284 484 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 TFCP2Q12800 502 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 CDC42EP5Q6NZY7 148 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 ZNF296Q8WUU4 475 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 XAGE2Q96GT9 111 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 PTPN18Q99952 460 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 AKAP2Q9Y2D5 859 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 GAKO14976 1311 aa12.06□□□□□ -0.48
TMEM39A-210ENST00000490099 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 LDHBP07195 334 aaKnown RBP12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 RLBP1P12271 317 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 MKRN3Q13064 507 aaKnown RBP12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 VGLL4Q14135 290 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 FAM151AQ8WW52 585 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 GPR108Q9NPR9 543 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 ZNF112Q9UJU3 913 aa12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
TMEM39A-210ENST00000490099 MAP3K10Q02779 954 aa12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 MVPQ14764 893 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 OPTNQ96CV9 577 aa12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 HOOK2Q96ED9 719 aa12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
TMEM39A-210ENST00000490099 SPDYE5A6NIY4 337 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 NFIAQ12857 509 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 ELP3Q9H9T3 547 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 RFX7Q2KHR2 1363 aa12.03□□□□□ -0.48
TMEM39A-210ENST00000490099 CCDC85CA6NKD9 419 aa12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 FKTNO75072 461 aa12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 ARID4AP29374 1257 aaPredicted RBP12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 BRI3BPQ8WY22 251 aa12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
TMEM39A-210ENST00000490099 GPR75-ASB3A0A0A6YYF3 556 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 ENTPD3O75355 529 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 DCAF15Q66K64 600 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 SPTY2D1Q68D10 685 aaPredicted RBP12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 OTUD7BQ6GQQ9 843 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 ERO1BQ86YB8 467 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 ZCCHC17Q9NP64 241 aaKnown RBP12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 CSADQ9Y600 493 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
TMEM39A-210ENST00000490099 MYH13Q9UKX3 1938 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 IGSF3O75054 1194 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
TMEM39A-210ENST00000490099 GTF2A2P52657 109 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 RHBDL3P58872 404 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 MECOMQ03112 1051 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 CRHR2Q13324 411 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 NOL9Q5SY16 702 aaKnown RBP12□□□□□ -0.49
TMEM39A-210ENST00000490099 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 SLF2Q8IX21 1173 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 ZKSCAN4Q969J2 545 aaPredicted RBP12□□□□□ -0.49
TMEM39A-210ENST00000490099 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 WRNIP1Q96S55 665 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
TMEM39A-210ENST00000490099 PHF20L1A8MW92 1017 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 IRF6O14896 467 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 UQCRFS1P1P0C7P4 283 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 INPP5BP32019 993 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 MCAMP43121 646 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 PPATQ06203 517 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 TCP10Q12799 353 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 PPIL2Q13356 520 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 FBXO46Q6PJ61 603 aaPredicted RBP11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 NSUN4Q96CB9 384 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms