RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 A0A1W2PQ27 194 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 A0A1W2PQ64 194 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 A0A1W2PQD8 194 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 SH2B2O14492 632 aaPredicted RBP17.44■□□□□ 0.38
COL9A1-208ENST00000489611 PLSCR1O15162 318 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 NR1I2O75469 434 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 PRKCSHP14314 528 aaPredicted RBP17.44■□□□□ 0.38
COL9A1-208ENST00000489611 RFC4P35249 363 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 TPRNQ4KMQ1 711 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.44■□□□□ 0.38
COL9A1-208ENST00000489611 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 MRVI1Q9Y6F6 885 aa17.44■□□□□ 0.38
COL9A1-208ENST00000489611 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 RCAN1P53805 252 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 FAM160A1Q05DH4 1040 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 UBE4AQ14139 1066 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 HELBQ8NG08 1087 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-208ENST00000489611 NAP1L5Q96NT1 182 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-208ENST00000489611 NBPF3Q9H094 633 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 RNF41Q9H4P4 317 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-208ENST00000489611 NID2Q14112 1375 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 KINO60870 393 aaKnown RBP17.43■□□□□ 0.38
COL9A1-208ENST00000489611 METAP2P50579 478 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL9A1-208ENST00000489611 CHRNDQ07001 517 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 SART3Q15020 963 aaKnown RBP17.43■□□□□ 0.38
COL9A1-208ENST00000489611 ADALQ6DHV7 355 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 TMTC2Q8N394 836 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
COL9A1-208ENST00000489611 CAMK4Q16566 473 aa17.42■□□□□ 0.38
COL9A1-208ENST00000489611 APOA5Q6Q788 366 aa17.42■□□□□ 0.38
COL9A1-208ENST00000489611 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
COL9A1-208ENST00000489611 NYXQ9GZU5 481 aa17.42■□□□□ 0.38
COL9A1-208ENST00000489611 BSDC1Q9NW68 430 aaPredicted RBP17.42■□□□□ 0.38
COL9A1-208ENST00000489611 A0A1B0GUL6 1792 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 ZBTB22O15209 634 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 IGSF3O75054 1194 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 SLC10A5Q5PT55 438 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 SYNE3Q6ZMZ3 975 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 WASF1Q92558 559 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 STK36Q9NRP7 1315 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 SEMA3EO15041 775 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 ZBTB43O43298 467 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 MBD4O95243 580 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 TPM2P07951 284 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 ME1P48163 572 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 IGDCC4Q8TDY8 1250 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 STAG1Q8WVM7 1258 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
COL9A1-208ENST00000489611 PPP2R5BQ15173 497 aa17.4■□□□□ 0.38
COL9A1-208ENST00000489611 ERFEQ4G0M1 354 aa17.4■□□□□ 0.38
COL9A1-208ENST00000489611 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
COL9A1-208ENST00000489611 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
COL9A1-208ENST00000489611 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.4■□□□□ 0.38
COL9A1-208ENST00000489611 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
COL9A1-208ENST00000489611 MRPS27Q92552 414 aaKnown RBP17.4■□□□□ 0.38
COL9A1-208ENST00000489611 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
COL9A1-208ENST00000489611 GPHNQ9NQX3 736 aaPredicted RBP17.4■□□□□ 0.38
COL9A1-208ENST00000489611 PDS5AQ29RF7 1337 aaKnown RBP17.4■□□□□ 0.38
COL9A1-208ENST00000489611 GSG1L2A8MUP6 293 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 PCP11498 1178 aaKnown RBP17.39■□□□□ 0.37
COL9A1-208ENST00000489611 ADRA2BP18089 450 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 ZNF827Q17R98 1081 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 ANO6Q4KMQ2 910 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 CYB5R4Q7L1T6 521 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 LINC00301Q8NCQ3 95 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 ENGASEQ8NFI3 743 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL9A1-208ENST00000489611 CCDC196A0A1B0GTZ2 297 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 B4E1Z4 1266 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 ZNF165P49910 485 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 BCAMP50895 628 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 TRIM29Q14134 588 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 STK38Q15208 465 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.37
COL9A1-208ENST00000489611 STX1AQ16623 288 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 JMYQ8N9B5 988 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 SLC12A7Q9Y666 1083 aa17.39■□□□□ 0.37
COL9A1-208ENST00000489611 ERICH2A1L162 156 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 CCDC69A6NI79 296 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 TDO2P48775 406 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 CEBPZQ03701 1054 aaKnown RBP17.38■□□□□ 0.37
COL9A1-208ENST00000489611 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
COL9A1-208ENST00000489611 NFXL1Q6ZNB6 911 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 CBX8Q9HC52 389 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
COL9A1-208ENST00000489611 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 CASZ1Q86V15 1759 aa17.38■□□□□ 0.37
COL9A1-208ENST00000489611 NEDD4P46934 1319 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms