RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
SSBP1-212ENST00000489378 OSBPP22059 807 aa11.9□□□□□ -0.5
SSBP1-212ENST00000489378 TTLL11Q8NHH1 800 aa11.9□□□□□ -0.5
SSBP1-212ENST00000489378 RAET1EQ8TD07 263 aa11.9□□□□□ -0.5
SSBP1-212ENST00000489378 U2AF1L4Q8WU68 220 aaKnown RBP11.9□□□□□ -0.5
SSBP1-212ENST00000489378 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
SSBP1-212ENST00000489378 CD209Q9NNX6 404 aa11.9□□□□□ -0.5
SSBP1-212ENST00000489378 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
SSBP1-212ENST00000489378 SPTBN5Q9NRC6 3674 aaKnown RBP11.89□□□□□ -0.51
SSBP1-212ENST00000489378 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-212ENST00000489378 PSMC4P43686 418 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSBP1-212ENST00000489378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.517e-9■□□□□ 9.4
SSBP1-212ENST00000489378 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 TEPSINQ96N21 525 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 GDF15Q99988 308 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 CPA4Q9UI42 421 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 MYH3P11055 1940 aa11.89□□□□□ -0.51
SSBP1-212ENST00000489378 TTC28Q96AY4 2481 aa11.88□□□□□ -0.51
SSBP1-212ENST00000489378 HOXB7P09629 217 aa11.88□□□□□ -0.51
SSBP1-212ENST00000489378 CETPP11597 493 aa11.88□□□□□ -0.51
SSBP1-212ENST00000489378 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
SSBP1-212ENST00000489378 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
SSBP1-212ENST00000489378 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
SSBP1-212ENST00000489378 BIN2Q9UBW5 565 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-212ENST00000489378 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
SSBP1-212ENST00000489378 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
SSBP1-212ENST00000489378 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 SNAP23O00161 211 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-212ENST00000489378 SGPL1O95470 568 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 BMP8BP34820 402 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
SSBP1-212ENST00000489378 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-212ENST00000489378 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 RNF166Q96A37 237 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-212ENST00000489378 ZCCHC17Q9NP64 241 aaKnown RBP11.87□□□□□ -0.51
SSBP1-212ENST00000489378 ZNF70Q9UC06 446 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-212ENST00000489378 CSADQ9Y600 493 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 IRS2Q9Y4H2 1338 aa11.87□□□□□ -0.51
SSBP1-212ENST00000489378 IRF6O14896 467 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 HOXD10P28358 340 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 BCAMP50895 628 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 UBXN2AP68543 259 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 PRKCZQ05513 592 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 LMOD3Q0VAK6 560 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 ANKRD2Q9GZV1 360 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 SNCAIPQ9Y6H5 919 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 ADGRA2Q96PE1 1338 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 IGHMBP2P38935 993 aaKnown RBP11.86□□□□□ -0.51
SSBP1-212ENST00000489378 KCNJ4P48050 445 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 TNFAIP1Q13829 316 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-212ENST00000489378 TDRD3Q9H7E2 651 aaKnown RBP11.86□□□□□ -0.51
SSBP1-212ENST00000489378 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
SSBP1-212ENST00000489378 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-212ENST00000489378 ZMYND8Q9ULU4 1186 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-212ENST00000489378 ARAP2Q8WZ64 1704 aa11.85□□□□□ -0.51
SSBP1-212ENST00000489378 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
SSBP1-212ENST00000489378 TFRCP02786 760 aaKnown RBP11.85□□□□□ -0.51
SSBP1-212ENST00000489378 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
SSBP1-212ENST00000489378 C7orf61Q8IZ16 206 aa11.85□□□□□ -0.51
SSBP1-212ENST00000489378 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
SSBP1-212ENST00000489378 PAWRQ96IZ0 340 aaKnown RBP11.85□□□□□ -0.51
SSBP1-212ENST00000489378 GABRQQ9UN88 632 aa11.85□□□□□ -0.51
SSBP1-212ENST00000489378 EYSQ5T1H1 3165 aa11.84□□□□□ -0.51
SSBP1-212ENST00000489378 IL1R1P14778 569 aa11.84□□□□□ -0.51
SSBP1-212ENST00000489378 FKBP1AP62942 108 aaKnown RBP11.84□□□□□ -0.51
SSBP1-212ENST00000489378 CHRNDQ07001 517 aa11.84□□□□□ -0.51
SSBP1-212ENST00000489378 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
SSBP1-212ENST00000489378 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
SSBP1-212ENST00000489378 ZKSCAN4Q969J2 545 aaPredicted RBP11.84□□□□□ -0.51
SSBP1-212ENST00000489378 DEFB118Q96PH6 123 aa11.84□□□□□ -0.51
SSBP1-212ENST00000489378 MGAMO43451 1857 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 PDHXO00330 501 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 TAF5LO75529 589 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 IGKV5-2P06315 115 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 ELNP15502 786 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 ITGA6P23229 1130 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 PPIL2Q13356 520 aa11.83□□□□□ -0.52
SSBP1-212ENST00000489378 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 ADCY3O60266 1144 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 INHAP05111 366 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 SYN1P17600 705 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 MAGEA10P43363 369 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-212ENST00000489378 LSM11P83369 360 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP1-212ENST00000489378 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
SSBP1-212ENST00000489378 DZIP1LQ8IYY4 767 aaKnown RBP11.82□□□□□ -0.52
SSBP1-212ENST00000489378 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-212ENST00000489378 GUCD1Q96NT3 240 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 WRNIP1Q96S55 665 aa11.82□□□□□ -0.52
SSBP1-212ENST00000489378 MPHOSPH8Q99549 860 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms