RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 DCAF15Q66K64 600 aa20.48■□□□□ 0.87
USP48-210ENST00000489108 APOBEC3HQ6NTF7 200 aaKnown RBP20.48■□□□□ 0.87
USP48-210ENST00000489108 ZDHHC15Q96MV8 337 aa20.48■□□□□ 0.87
USP48-210ENST00000489108 ZNF341Q9BYN7 854 aa20.48■□□□□ 0.87
USP48-210ENST00000489108 C9orf78Q9NZ63 289 aaPredicted RBP20.48■□□□□ 0.87
USP48-210ENST00000489108 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
USP48-210ENST00000489108 ZBTB7BO15156 539 aaPredicted RBP20.47■□□□□ 0.87
USP48-210ENST00000489108 FKBP1CQ5VVH2 108 aa20.47■□□□□ 0.87
USP48-210ENST00000489108 TBC1D22AQ8WUA7 517 aa20.47■□□□□ 0.87
USP48-210ENST00000489108 MRIQ9BWK5 157 aa20.47■□□□□ 0.87
USP48-210ENST00000489108 IL16Q14005 1332 aa20.47■□□□□ 0.87
USP48-210ENST00000489108 UBXN2AP68543 259 aa20.46■□□□□ 0.87
USP48-210ENST00000489108 PRKCZQ05513 592 aa20.46■□□□□ 0.87
USP48-210ENST00000489108 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
USP48-210ENST00000489108 FANCIQ9NVI1 1328 aa20.46■□□□□ 0.87
USP48-210ENST00000489108 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
USP48-210ENST00000489108 MOGSQ13724 837 aa20.45■□□□□ 0.86
USP48-210ENST00000489108 CAVIN4Q5BKX8 364 aa20.45■□□□□ 0.86
USP48-210ENST00000489108 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
USP48-210ENST00000489108 UNC93B1Q9H1C4 597 aa20.45■□□□□ 0.86
USP48-210ENST00000489108 KCNH4Q9UQ05 1017 aa20.45■□□□□ 0.86
USP48-210ENST00000489108 MROH5Q6ZUA9 1318 aa20.45■□□□□ 0.86
USP48-210ENST00000489108 SOX1O00570 391 aaPredicted RBP20.44■□□□□ 0.86
USP48-210ENST00000489108 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
USP48-210ENST00000489108 SUCLG2Q96I99 432 aa20.44■□□□□ 0.86
USP48-210ENST00000489108 GABRQQ9UN88 632 aa20.44■□□□□ 0.86
USP48-210ENST00000489108 COL6A3P12111 3177 aa20.44■□□□□ 0.86
USP48-210ENST00000489108 SGPL1O95470 568 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 BCAMP50895 628 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 HHIPL2Q6UWX4 724 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 ZNF112Q9UJU3 913 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 MGAMO43451 1857 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 AK9Q5TCS8 1911 aa20.43■□□□□ 0.86
USP48-210ENST00000489108 CYP2C8P10632 490 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 BCRP11274 1271 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 FCGRTP55899 365 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 GPAT2Q6NUI2 795 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 SLAIN1Q8ND83 568 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 FAM151AQ8WW52 585 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 LRCH3Q96II8 777 aa20.42■□□□□ 0.86
USP48-210ENST00000489108 RPAP1Q9BWH6 1393 aaPredicted RBP20.42■□□□□ 0.86
USP48-210ENST00000489108 EVI5O60447 810 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 TCP10Q12799 353 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 METTL24Q5JXM2 366 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 SLC4A10Q6U841 1118 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 STAP2Q9UGK3 403 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 SUGT1Q9Y2Z0 365 aa20.41■□□□□ 0.86
USP48-210ENST00000489108 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
USP48-210ENST00000489108 A0A1W2PPC1 479 aa20.4■□□□□ 0.86
USP48-210ENST00000489108 MAST3O60307 1309 aa20.4■□□□□ 0.86
USP48-210ENST00000489108 PARK7Q99497 189 aaKnown RBP20.4■□□□□ 0.86
USP48-210ENST00000489108 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
USP48-210ENST00000489108 ADCY3O60266 1144 aa20.39■□□□□ 0.85
USP48-210ENST00000489108 PDE8BO95263 885 aa20.39■□□□□ 0.85
USP48-210ENST00000489108 TFRCP02786 760 aaKnown RBP20.39■□□□□ 0.85
USP48-210ENST00000489108 NBPF7P0C2Y1 421 aaPredicted RBP20.39■□□□□ 0.85
USP48-210ENST00000489108 VGLL2Q8N8G2 317 aa20.39■□□□□ 0.85
USP48-210ENST00000489108 CXCL11O14625 94 aa20.38■□□□□ 0.85
USP48-210ENST00000489108 ELNP15502 786 aa20.38■□□□□ 0.85
USP48-210ENST00000489108 FLT3LGP49771 235 aa20.38■□□□□ 0.85
USP48-210ENST00000489108 NOL9Q5SY16 702 aaKnown RBP20.38■□□□□ 0.85
USP48-210ENST00000489108 CDC42EP5Q6NZY7 148 aa20.38■□□□□ 0.85
USP48-210ENST00000489108 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
USP48-210ENST00000489108 INHAP05111 366 aa20.37■□□□□ 0.85
USP48-210ENST00000489108 NFIAQ12857 509 aa20.37■□□□□ 0.85
USP48-210ENST00000489108 DEFB118Q96PH6 123 aa20.37■□□□□ 0.85
USP48-210ENST00000489108 BICC1Q9H694 974 aaKnown RBP20.37■□□□□ 0.85
USP48-210ENST00000489108 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
USP48-210ENST00000489108 DAGLAQ9Y4D2 1042 aa20.36■□□□□ 0.85
USP48-210ENST00000489108 LAMA3Q16787 3333 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 RABL6Q3YEC7 729 aaPredicted RBP20.35■□□□□ 0.85
USP48-210ENST00000489108 WDR63Q8IWG1 891 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 ZFPM1Q8IX07 1006 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 KLHDC4Q8TBB5 520 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 PXYLP1Q8TE99 480 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 FAM198AQ9UFP1 575 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 ZHX2Q9Y6X8 837 aa20.35■□□□□ 0.85
USP48-210ENST00000489108 UTYO14607 1347 aa20.34■□□□□ 0.85
USP48-210ENST00000489108 FGFR2P21802 821 aa20.34■□□□□ 0.85
USP48-210ENST00000489108 DIXDC1Q155Q3 683 aa20.34■□□□□ 0.85
USP48-210ENST00000489108 FASTKD5Q7L8L6 764 aaKnown RBP20.34■□□□□ 0.85
USP48-210ENST00000489108 ANKRD44Q8N8A2 993 aa20.34■□□□□ 0.85
USP48-210ENST00000489108 WDR66Q8TBY9 1149 aa20.34■□□□□ 0.85
USP48-210ENST00000489108 PAWRQ96IZ0 340 aaKnown RBP20.34■□□□□ 0.85
USP48-210ENST00000489108 DOCK3Q8IZD9 2030 aa20.34■□□□□ 0.85
USP48-210ENST00000489108 ALPK3Q96L96 1907 aa20.33■□□□□ 0.85
USP48-210ENST00000489108 PHF20L1A8MW92 1017 aa20.33■□□□□ 0.85
USP48-210ENST00000489108 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.85
USP48-210ENST00000489108 GADL1Q6ZQY3 521 aa20.33■□□□□ 0.85
USP48-210ENST00000489108 CRISPLD2Q9H0B8 497 aa20.33■□□□□ 0.85
USP48-210ENST00000489108 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.85
USP48-210ENST00000489108 PAK6Q9NQU5 681 aaPredicted RBP20.33■□□□□ 0.85
USP48-210ENST00000489108 USP40Q9NVE5 1235 aa20.33■□□□□ 0.85
USP48-210ENST00000489108 A0A0G2JLL6 359 aaPredicted RBP20.32■□□□□ 0.84
USP48-210ENST00000489108 TNPO2O14787 897 aaKnown RBP20.32■□□□□ 0.84
USP48-210ENST00000489108 CAPN2P17655 700 aa20.32■□□□□ 0.84
USP48-210ENST00000489108 IRF5Q13568 498 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms