RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 MSMPQ1L6U9 139 aa8.45□□□□□ -1.06
CTNNB1-215ENST00000488914 RPS26P11Q5JNZ5 115 aaPredicted RBP8.45□□□□□ -1.06
CTNNB1-215ENST00000488914 DTHD1Q6ZMT9 781 aa8.45□□□□□ -1.06
CTNNB1-215ENST00000488914 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
CTNNB1-215ENST00000488914 STK35Q8TDR2 534 aa8.45□□□□□ -1.06
CTNNB1-215ENST00000488914 BCO2Q9BYV7 579 aa8.45□□□□□ -1.06
CTNNB1-215ENST00000488914 FOSL1P15407 271 aa8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 MAPK1P28482 360 aa8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 SEZ6L2Q6UXD5 910 aa8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 SETDB2Q96T68 719 aa8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 YIPF2Q9BWQ6 316 aa8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 C1GALT1Q9NS00 363 aa8.44□□□□□ -1.06
CTNNB1-215ENST00000488914 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 PNMA6FA0A0J9YX94 578 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 WNT11O96014 354 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 PLCB3Q01970 1234 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 HP1BP3Q5SSJ5 553 aaPredicted RBP8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 NXPE4Q6UWF7 544 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 NFXL1Q6ZNB6 911 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 GIMAP7Q8NHV1 300 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 ZFYVE1Q9HBF4 777 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 DAGLAQ9Y4D2 1042 aa8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
CTNNB1-215ENST00000488914 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
CTNNB1-215ENST00000488914 TREHO43280 583 aa8.42□□□□□ -1.06
CTNNB1-215ENST00000488914 MAP7Q14244 749 aa8.42□□□□□ -1.06
CTNNB1-215ENST00000488914 ENOX2Q16206 610 aaKnown RBP8.42□□□□□ -1.06
CTNNB1-215ENST00000488914 ZNF765Q7L2R6 523 aa8.42□□□□□ -1.06
CTNNB1-215ENST00000488914 GPN3Q9UHW5 284 aaPredicted RBP8.42□□□□□ -1.06
CTNNB1-215ENST00000488914 GSTP1P09211 210 aaKnown RBP8.41□□□□□ -1.06
CTNNB1-215ENST00000488914 IRAK1P51617 712 aa8.41□□□□□ -1.06
CTNNB1-215ENST00000488914 PDZD3Q86UT5 571 aa8.41□□□□□ -1.06
CTNNB1-215ENST00000488914 CRIM1Q9NZV1 1036 aa8.41□□□□□ -1.06
CTNNB1-215ENST00000488914 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
CTNNB1-215ENST00000488914 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
CTNNB1-215ENST00000488914 CYP26A1O43174 497 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 TAL1P17542 331 aaPredicted RBP8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 KRTAP4-12Q9BQ66 201 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 TMEM39AQ9NV64 488 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 CCDC39Q9UFE4 941 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.06
CTNNB1-215ENST00000488914 MPRIPQ6WCQ1 1025 aa8.39□□□□□ -1.07
CTNNB1-215ENST00000488914 KCNB2Q92953 911 aa8.39□□□□□ -1.07
CTNNB1-215ENST00000488914 METTL22Q9BUU2 404 aaPredicted RBP8.39□□□□□ -1.07
CTNNB1-215ENST00000488914 LRRC4CQ9HCJ2 640 aa8.39□□□□□ -1.07
CTNNB1-215ENST00000488914 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
CTNNB1-215ENST00000488914 SYNGAP1Q96PV0 1343 aa8.38□□□□□ -1.07
CTNNB1-215ENST00000488914 CPSF6Q16630 551 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNNB1-215ENST00000488914 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
CTNNB1-215ENST00000488914 ABI1Q8IZP0 508 aa8.38□□□□□ -1.07
CTNNB1-215ENST00000488914 C3orf58Q8NDZ4 430 aa8.38□□□□□ -1.07
CTNNB1-215ENST00000488914 ZC3H7BQ9UGR2 993 aaKnown RBP8.38□□□□□ -1.07
CTNNB1-215ENST00000488914 MAPK8P45983 427 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 ID3Q02535 119 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 CDK5R2Q13319 367 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 DUSP27Q5VZP5 1158 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 SULF2Q8IWU5 870 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 OSBPL7Q9BZF2 842 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 ADGRE2Q9UHX3 823 aa8.37□□□□□ -1.07
CTNNB1-215ENST00000488914 PRNPP04156 253 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 SLFN14P0C7P3 912 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 PPP2R3AQ06190 1150 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 COL19A1Q14993 1142 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 OGFOD3Q6PK18 319 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 KRT82Q9NSB4 513 aa8.36□□□□□ -1.07
CTNNB1-215ENST00000488914 XRCC5P13010 732 aaKnown RBP8.35□□□□□ -1.07
CTNNB1-215ENST00000488914 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
CTNNB1-215ENST00000488914 ARNTP27540 789 aa8.35□□□□□ -1.07
CTNNB1-215ENST00000488914 FMR1Q06787 632 aaKnown RBP eCLIP8.35□□□□□ -1.072e-6■■□□□ 14.1
CTNNB1-215ENST00000488914 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
CTNNB1-215ENST00000488914 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
CTNNB1-215ENST00000488914 ANGEL1Q9UNK9 670 aaKnown RBP8.35□□□□□ -1.07
CTNNB1-215ENST00000488914 FBXO24O75426 580 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 PAGE1O75459 146 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 NEFMP07197 916 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 GPBAR1Q8TDU6 330 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 ATXN3LQ9H3M9 355 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 PIDD1Q9HB75 910 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 U3KQE9 123 aa8.34□□□□□ -1.07
CTNNB1-215ENST00000488914 ENC1O14682 589 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 FAM87AP0C7U9 286 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 NME2P22392 152 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 CYP27A1Q02318 531 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 RASIP1Q5U651 963 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
CTNNB1-215ENST00000488914 LEFTY1O75610 366 aa8.32□□□□□ -1.08
CTNNB1-215ENST00000488914 BMP6P22004 513 aa8.32□□□□□ -1.08
CTNNB1-215ENST00000488914 ZC3H12AQ5D1E8 599 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms