RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ZFYVE28Q9HCC9 887 aa22.97■■□□□ 1.27
HDAC6-231ENST00000488905 NOB1Q9ULX3 412 aaKnown RBP22.97■■□□□ 1.27
HDAC6-231ENST00000488905 DAGLAQ9Y4D2 1042 aa22.97■■□□□ 1.27
HDAC6-231ENST00000488905 PRDX5P30044 214 aa22.96■■□□□ 1.27
HDAC6-231ENST00000488905 ZKSCAN4Q969J2 545 aaPredicted RBP22.96■■□□□ 1.27
HDAC6-231ENST00000488905 API5Q9BZZ5 524 aaKnown RBP22.96■■□□□ 1.27
HDAC6-231ENST00000488905 CEP126Q9P2H0 1117 aa22.96■■□□□ 1.27
HDAC6-231ENST00000488905 LRRFIP2Q9Y608 721 aaKnown RBP22.96■■□□□ 1.27
HDAC6-231ENST00000488905 DIXDC1Q155Q3 683 aa22.95■■□□□ 1.26
HDAC6-231ENST00000488905 ZNF341Q9BYN7 854 aa22.95■■□□□ 1.26
HDAC6-231ENST00000488905 CETPP11597 493 aa22.94■■□□□ 1.26
HDAC6-231ENST00000488905 PPIL2Q13356 520 aa22.94■■□□□ 1.26
HDAC6-231ENST00000488905 FAM151AQ8WW52 585 aa22.94■■□□□ 1.26
HDAC6-231ENST00000488905 ARMC5Q96C12 935 aa22.94■■□□□ 1.26
HDAC6-231ENST00000488905 GNL3LQ9NVN8 582 aaKnown RBP22.94■■□□□ 1.26
HDAC6-231ENST00000488905 SALL1Q9NSC2 1324 aa22.93■■□□□ 1.26
HDAC6-231ENST00000488905 POTEFA5A3E0 1075 aa22.93■■□□□ 1.26
HDAC6-231ENST00000488905 IRF6O14896 467 aa22.93■■□□□ 1.26
HDAC6-231ENST00000488905 LDHBP07195 334 aaKnown RBP22.93■■□□□ 1.26
HDAC6-231ENST00000488905 IL15P40933 162 aaPredicted RBP22.93■■□□□ 1.26
HDAC6-231ENST00000488905 SNAPC2Q13487 334 aa22.93■■□□□ 1.26
HDAC6-231ENST00000488905 CDC42EP5Q6NZY7 148 aa22.93■■□□□ 1.26
HDAC6-231ENST00000488905 ZCCHC17Q9NP64 241 aaKnown RBP22.93■■□□□ 1.26
HDAC6-231ENST00000488905 PA2G4Q9UQ80 394 aaKnown RBP22.93■■□□□ 1.26
HDAC6-231ENST00000488905 HDAC5Q9UQL6 1122 aa22.93■■□□□ 1.26
HDAC6-231ENST00000488905 SEMA3EO15041 775 aa22.92■■□□□ 1.26
HDAC6-231ENST00000488905 WDHD1O75717 1129 aaPredicted RBP22.92■■□□□ 1.26
HDAC6-231ENST00000488905 PHKA1P46020 1223 aa22.92■■□□□ 1.26
HDAC6-231ENST00000488905 MIGA2Q7L4E1 593 aa22.92■■□□□ 1.26
HDAC6-231ENST00000488905 MEIS3Q99687 375 aa22.92■■□□□ 1.26
HDAC6-231ENST00000488905 DENND2AQ9ULE3 1009 aa22.92■■□□□ 1.26
HDAC6-231ENST00000488905 PTPRFP10586 1907 aa22.91■■□□□ 1.26
HDAC6-231ENST00000488905 BTBD19C9JJ37 291 aa22.91■■□□□ 1.26
HDAC6-231ENST00000488905 INPP5BP32019 993 aa22.91■■□□□ 1.26
HDAC6-231ENST00000488905 NFIAQ12857 509 aa22.91■■□□□ 1.26
HDAC6-231ENST00000488905 ARHGEF6Q15052 776 aa22.91■■□□□ 1.26
HDAC6-231ENST00000488905 COPRSQ9NQ92 184 aa22.91■■□□□ 1.26
HDAC6-231ENST00000488905 TLR2O60603 784 aa22.9■■□□□ 1.26
HDAC6-231ENST00000488905 PPATQ06203 517 aa22.9■■□□□ 1.26
HDAC6-231ENST00000488905 TCP10Q12799 353 aa22.9■■□□□ 1.26
HDAC6-231ENST00000488905 ZBTB22O15209 634 aa22.89■■□□□ 1.25
HDAC6-231ENST00000488905 ADORA1P30542 326 aa22.89■■□□□ 1.25
HDAC6-231ENST00000488905 RARSP54136 660 aaKnown RBP22.89■■□□□ 1.25
HDAC6-231ENST00000488905 FAM198AQ9UFP1 575 aa22.89■■□□□ 1.25
HDAC6-231ENST00000488905 PTCH2Q9Y6C5 1203 aa22.89■■□□□ 1.25
HDAC6-231ENST00000488905 DOCK1Q14185 1865 aa22.89■■□□□ 1.25
HDAC6-231ENST00000488905 RFX7Q2KHR2 1363 aa22.89■■□□□ 1.25
HDAC6-231ENST00000488905 CCDC102BQ68D86 513 aa22.88■■□□□ 1.25
HDAC6-231ENST00000488905 ZGPATQ8N5A5 531 aaKnown RBP22.88■■□□□ 1.25
HDAC6-231ENST00000488905 ZNF112Q9UJU3 913 aa22.88■■□□□ 1.25
HDAC6-231ENST00000488905 SLC9C1Q4G0N8 1177 aa22.87■■□□□ 1.25
HDAC6-231ENST00000488905 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.87■■□□□ 1.25
HDAC6-231ENST00000488905 ZNF333Q96JL9 665 aa22.87■■□□□ 1.25
HDAC6-231ENST00000488905 USP40Q9NVE5 1235 aa22.87■■□□□ 1.25
HDAC6-231ENST00000488905 MGAMO43451 1857 aa22.87■■□□□ 1.25
HDAC6-231ENST00000488905 ATRNL1Q5VV63 1379 aa22.87■■□□□ 1.25
HDAC6-231ENST00000488905 PHIPQ8WWQ0 1821 aa22.87■■□□□ 1.25
HDAC6-231ENST00000488905 GAKO14976 1311 aa22.86■■□□□ 1.25
HDAC6-231ENST00000488905 PDS5AQ29RF7 1337 aaKnown RBP22.86■■□□□ 1.25
HDAC6-231ENST00000488905 CCER2I3L3R5 266 aa22.86■■□□□ 1.25
HDAC6-231ENST00000488905 LACTBP83111 547 aaPredicted RBP22.86■■□□□ 1.25
HDAC6-231ENST00000488905 RASGRF1Q13972 1273 aa22.86■■□□□ 1.25
HDAC6-231ENST00000488905 NOL9Q5SY16 702 aaKnown RBP22.86■■□□□ 1.25
HDAC6-231ENST00000488905 ARHGAP45Q92619 1136 aa22.86■■□□□ 1.25
HDAC6-231ENST00000488905 ARHGAP39Q9C0H5 1083 aa22.86■■□□□ 1.25
HDAC6-231ENST00000488905 KCNH4Q9UQ05 1017 aa22.86■■□□□ 1.25
HDAC6-231ENST00000488905 GNAI3P08754 354 aa22.85■■□□□ 1.25
HDAC6-231ENST00000488905 KIF22Q14807 665 aa22.85■■□□□ 1.25
HDAC6-231ENST00000488905 SRGAP3O43295 1099 aa22.84■■□□□ 1.25
HDAC6-231ENST00000488905 MTX1Q13505 466 aa22.84■■□□□ 1.25
HDAC6-231ENST00000488905 ANKRD23Q86SG2 305 aa22.84■■□□□ 1.25
HDAC6-231ENST00000488905 NBPF11Q86T75 865 aa22.84■■□□□ 1.25
HDAC6-231ENST00000488905 DZIP1Q86YF9 867 aaKnown RBP22.84■■□□□ 1.25
HDAC6-231ENST00000488905 A0A1B0GUL7 405 aa22.83■■□□□ 1.25
HDAC6-231ENST00000488905 EN2P19622 333 aaPredicted RBP22.83■■□□□ 1.25
HDAC6-231ENST00000488905 RGS3P49796 1198 aa22.83■■□□□ 1.25
HDAC6-231ENST00000488905 TIMM10P62072 90 aa22.83■■□□□ 1.25
HDAC6-231ENST00000488905 ZFPM1Q8IX07 1006 aa22.83■■□□□ 1.25
HDAC6-231ENST00000488905 IDI2Q9BXS1 227 aa22.83■■□□□ 1.25
HDAC6-231ENST00000488905 ATAD5Q96QE3 1844 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 ENTPD3O75355 529 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 C17orf99Q6UX52 265 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 TMEM106CQ9BVX2 250 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 ABCF2Q9UG63 623 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 AKAP2Q9Y2D5 859 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 ADGRA2Q96PE1 1338 aa22.82■■□□□ 1.24
HDAC6-231ENST00000488905 MAST2Q6P0Q8 1798 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 PDHXO00330 501 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 GNRH1P01148 92 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 TFCP2Q12800 502 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 MOGSQ13724 837 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 MVPQ14764 893 aaKnown RBP22.81■■□□□ 1.24
HDAC6-231ENST00000488905 SLF2Q8IX21 1173 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 XAGE2Q96GT9 111 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 CPA4Q9UI42 421 aa22.81■■□□□ 1.24
HDAC6-231ENST00000488905 TRIM27P14373 513 aa22.8■■□□□ 1.24
HDAC6-231ENST00000488905 SPTY2D1Q68D10 685 aaPredicted RBP22.8■■□□□ 1.24
HDAC6-231ENST00000488905 MROH7-TTC4A0A0A0MT08 1334 aa22.8■■□□□ 1.24
HDAC6-231ENST00000488905 CEP290O15078 2479 aa22.79■■□□□ 1.24
HDAC6-231ENST00000488905 PHF20L1A8MW92 1017 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms