RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 RASA3Q14644 834 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 SHROOM1Q2M3G4 852 aaPredicted RBP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 CDC37L1Q7L3B6 337 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 SAPCD2Q86UD0 394 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 KLRG1Q96E93 195 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 CLMNQ96JQ2 1002 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 VEZTQ9HBM0 779 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 DENND2AQ9ULE3 1009 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 TLL2Q9Y6L7 1015 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 PDS5AQ29RF7 1337 aaKnown RBP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 PITPNM2Q9BZ72 1349 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 TCRBV5S4A2TA0A5A2 114 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 RASSF10A6NK89 507 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 WDHD1O75717 1129 aaPredicted RBP8□□□□□ -1.13
PTPRD-212ENST00000488774 LDHBP07195 334 aaKnown RBP8□□□□□ -1.13
PTPRD-212ENST00000488774 PDE4AP27815 886 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 GJA5P36382 358 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 RRP1BQ14684 758 aaKnown RBP8□□□□□ -1.13
PTPRD-212ENST00000488774 OGFOD1Q8N543 542 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 WDR66Q8TBY9 1149 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 PI4K2BQ8TCG2 481 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 SH3RF3Q8TEJ3 882 aaPredicted RBP8□□□□□ -1.13
PTPRD-212ENST00000488774 DCPSQ96C86 337 aaKnown RBP8□□□□□ -1.13
PTPRD-212ENST00000488774 KIF1BPQ96EK5 621 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 ZNF512BQ96KM6 892 aaPredicted RBP8□□□□□ -1.13
PTPRD-212ENST00000488774 BOLA2Q9H3K6 86 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 MROH7-TTC4A0A0A0MT08 1334 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 DOCK3Q8IZD9 2030 aa8□□□□□ -1.13
PTPRD-212ENST00000488774 DDTLA6NHG4 134 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-212ENST00000488774 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 SEMA3EO15041 775 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 USP2O75604 605 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-212ENST00000488774 BTDP43251 543 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 JAG1P78504 1218 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 TCP10Q12799 353 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-212ENST00000488774 GORABQ5T7V8 394 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 HHIPL2Q6UWX4 724 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 TBC1D22AQ8WUA7 517 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 TEKT1Q969V4 418 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 LRRCC1Q9C099 1032 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 GBA2Q9HCG7 927 aaPredicted RBP7.99□□□□□ -1.13
PTPRD-212ENST00000488774 PARP14Q460N5 1801 aa7.99□□□□□ -1.13
PTPRD-212ENST00000488774 GREB1LQ9C091 1923 aaPredicted RBP7.98□□□□□ -1.13
PTPRD-212ENST00000488774 GPR75-ASB3A0A0A6YYF3 556 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 GOLIM4O00461 696 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 RAB11FIP3O75154 756 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 HMMRO75330 724 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 HDLBPQ00341 1268 aaKnown RBP7.98□□□□□ -1.13
PTPRD-212ENST00000488774 GRM1Q13255 1194 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 SLC4A8Q2Y0W8 1093 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 B4GALNT3Q6L9W6 998 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 ERC1Q8IUD2 1116 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 SULF1Q8IWU6 871 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 SMC5Q8IY18 1101 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 JMYQ8N9B5 988 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 MIGA1Q8NAN2 632 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 DNAJC2Q99543 621 aaKnown RBP7.98□□□□□ -1.13
PTPRD-212ENST00000488774 MRIQ9BWK5 157 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 USP40Q9NVE5 1235 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 GNL3LQ9NVN8 582 aaKnown RBP7.98□□□□□ -1.13
PTPRD-212ENST00000488774 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
PTPRD-212ENST00000488774 HDAC9Q9UKV0 1011 aa7.98□□□□□ -1.13
PTPRD-212ENST00000488774 ABT1Q9ULW3 272 aaKnown RBP7.98□□□□□ -1.13
PTPRD-212ENST00000488774 PRKAB2O43741 272 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 UQCRFS1P1P0C7P4 283 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 ATP5JP18859 108 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 RGS3P49796 1198 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 HUNKP57058 714 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 MKRN3Q13064 507 aaKnown RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 DEFB115Q30KQ5 88 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 CCDC158Q5M9N0 1113 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 LDLRAD1Q5T700 205 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 ANKRD45Q5TZF3 282 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 ERICH6Q7L0X2 663 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 MIGA2Q7L4E1 593 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 CCDC84Q86UT8 332 aaPredicted RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 RASAL3Q86YV0 1011 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 CLASRPQ8N2M8 674 aaKnown RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 MAGEB6Q8N7X4 407 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 FAM163AQ96GL9 167 aaPredicted RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 CAPNS2Q96L46 248 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 HAUS7Q99871 368 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 DNAJC18Q9H819 358 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 AATFQ9NY61 560 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 RAI14Q9P0K7 980 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 TSKSQ9UJT2 592 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 SUGT1Q9Y2Z0 365 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 U3KPZ7 1027 aaPredicted RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 MGAMO43451 1857 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 RLFQ13129 1914 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 MYH4Q9Y623 1939 aa7.97□□□□□ -1.13
PTPRD-212ENST00000488774 WDR33Q9C0J8 1336 aaKnown RBP7.97□□□□□ -1.13
PTPRD-212ENST00000488774 LOC285556D6RIA3 1793 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms