RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 HMMRO75330 724 aa23.26■■□□□ 1.31
HDAC10-215ENST00000488270 TNNI2P48788 182 aa23.26■■□□□ 1.31
HDAC10-215ENST00000488270 CTCFP49711 727 aaPredicted RBP23.26■■□□□ 1.31
HDAC10-215ENST00000488270 RRP1P56182 461 aaKnown RBP23.26■■□□□ 1.31
HDAC10-215ENST00000488270 NFIAQ12857 509 aa23.26■■□□□ 1.31
HDAC10-215ENST00000488270 CCDC158Q5M9N0 1113 aa23.26■■□□□ 1.31
HDAC10-215ENST00000488270 AIDAQ96BJ3 306 aa23.26■■□□□ 1.31
HDAC10-215ENST00000488270 CYP2E1P05181 493 aaPredicted RBP23.25■■□□□ 1.31
HDAC10-215ENST00000488270 HSPA8P11142 646 aaKnown RBP23.25■■□□□ 1.31
HDAC10-215ENST00000488270 TTC39AQ5SRH9 613 aa23.25■■□□□ 1.31
HDAC10-215ENST00000488270 ERICH6Q7L0X2 663 aa23.25■■□□□ 1.31
HDAC10-215ENST00000488270 DZIP1Q86YF9 867 aaKnown RBP23.25■■□□□ 1.31
HDAC10-215ENST00000488270 NSUN4Q96CB9 384 aaKnown RBP23.25■■□□□ 1.31
HDAC10-215ENST00000488270 CLMNQ96JQ2 1002 aa23.25■■□□□ 1.31
HDAC10-215ENST00000488270 IL1RAPL2Q9NP60 686 aa23.25■■□□□ 1.31
HDAC10-215ENST00000488270 USP40Q9NVE5 1235 aa23.25■■□□□ 1.31
HDAC10-215ENST00000488270 FAM198AQ9UFP1 575 aa23.25■■□□□ 1.31
HDAC10-215ENST00000488270 UNCXA6NJT0 531 aa23.24■■□□□ 1.31
HDAC10-215ENST00000488270 AACSQ86V21 672 aa23.24■■□□□ 1.31
HDAC10-215ENST00000488270 TMOD2Q9NZR1 351 aa23.24■■□□□ 1.31
HDAC10-215ENST00000488270 ECM29Q5VYK3 1845 aa23.24■■□□□ 1.31
HDAC10-215ENST00000488270 GPR75-ASB3A0A0A6YYF3 556 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 RAB11FIP3O75154 756 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 ZAP70P43403 619 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 LBX1P52954 281 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 KIF1BPQ96EK5 621 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 PRDM10Q9NQV6 1147 aa23.23■■□□□ 1.31
HDAC10-215ENST00000488270 APBB1O00213 710 aa23.22■■□□□ 1.31
HDAC10-215ENST00000488270 IDI2Q9BXS1 227 aa23.22■■□□□ 1.31
HDAC10-215ENST00000488270 MROH7-TTC4A0A0A0MT08 1334 aa23.22■■□□□ 1.31
HDAC10-215ENST00000488270 RHBDL3P58872 404 aa23.21■■□□□ 1.31
HDAC10-215ENST00000488270 SPRYD7Q5W111 196 aa23.21■■□□□ 1.31
HDAC10-215ENST00000488270 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.21■■□□□ 1.31
HDAC10-215ENST00000488270 SLF2Q8IX21 1173 aa23.21■■□□□ 1.31
HDAC10-215ENST00000488270 SLC10A4Q96EP9 437 aa23.21■■□□□ 1.31
HDAC10-215ENST00000488270 BEGAINQ9BUH8 593 aa23.21■■□□□ 1.31
HDAC10-215ENST00000488270 PIH1D3Q9NQM4 214 aaKnown RBP23.21■■□□□ 1.31
HDAC10-215ENST00000488270 RFX7Q2KHR2 1363 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 CA12O43570 354 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 WDHD1O75717 1129 aaPredicted RBP23.2■■□□□ 1.3
HDAC10-215ENST00000488270 BTDP43251 543 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 IREB2P48200 963 aaKnown RBP23.2■■□□□ 1.3
HDAC10-215ENST00000488270 TCP10Q12799 353 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 RAI14Q9P0K7 980 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 LRP2BPQ9P2M1 347 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 TSKSQ9UJT2 592 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 PCDHB15Q9Y5E8 787 aa23.2■■□□□ 1.3
HDAC10-215ENST00000488270 RPAP1Q9BWH6 1393 aaPredicted RBP23.19■■□□□ 1.3
HDAC10-215ENST00000488270 CLASRPQ8N2M8 674 aaKnown RBP23.19■■□□□ 1.3
HDAC10-215ENST00000488270 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.19■■□□□ 1.3
HDAC10-215ENST00000488270 MYH13Q9UKX3 1938 aa23.19■■□□□ 1.3
HDAC10-215ENST00000488270 GJA5P36382 358 aa23.18■■□□□ 1.3
HDAC10-215ENST00000488270 TM4SF4P48230 202 aa23.18■■□□□ 1.3
HDAC10-215ENST00000488270 MKRN3Q13064 507 aaKnown RBP23.18■■□□□ 1.3
HDAC10-215ENST00000488270 SH3BP5LQ7L8J4 393 aa23.18■■□□□ 1.3
HDAC10-215ENST00000488270 REM2Q8IYK8 340 aaPredicted RBP23.18■■□□□ 1.3
HDAC10-215ENST00000488270 ANKRD13AQ8IZ07 590 aa23.18■■□□□ 1.3
HDAC10-215ENST00000488270 DDX4Q9NQI0 724 aaKnown RBP23.18■■□□□ 1.3
HDAC10-215ENST00000488270 RNF186Q9NXI6 227 aa23.18■■□□□ 1.3
HDAC10-215ENST00000488270 NDUFB9Q9Y6M9 179 aa23.18■■□□□ 1.3
HDAC10-215ENST00000488270 LDHCP07864 332 aa23.17■■□□□ 1.3
HDAC10-215ENST00000488270 RGS3P49796 1198 aa23.17■■□□□ 1.3
HDAC10-215ENST00000488270 GSTO1P78417 241 aa23.17■■□□□ 1.3
HDAC10-215ENST00000488270 MAP3K9P80192 1104 aa23.17■■□□□ 1.3
HDAC10-215ENST00000488270 ANTXR1Q9H6X2 564 aa23.17■■□□□ 1.3
HDAC10-215ENST00000488270 DCTPP1Q9H773 170 aa23.17■■□□□ 1.3
HDAC10-215ENST00000488270 ENTPD3O75355 529 aa23.16■■□□□ 1.3
HDAC10-215ENST00000488270 MIGA2Q7L4E1 593 aa23.16■■□□□ 1.3
HDAC10-215ENST00000488270 ADGRA1Q86SQ6 560 aa23.16■■□□□ 1.3
HDAC10-215ENST00000488270 WNK4Q96J92 1243 aa23.16■■□□□ 1.3
HDAC10-215ENST00000488270 SAGE1Q9NXZ1 904 aa23.16■■□□□ 1.3
HDAC10-215ENST00000488270 VGLL4Q14135 290 aa23.15■■□□□ 1.3
HDAC10-215ENST00000488270 CRBNQ96SW2 442 aa23.15■■□□□ 1.3
HDAC10-215ENST00000488270 AKAP11Q9UKA4 1901 aa23.15■■□□□ 1.3
HDAC10-215ENST00000488270 ATRNL1Q5VV63 1379 aa23.14■■□□□ 1.3
HDAC10-215ENST00000488270 IGSF3O75054 1194 aa23.14■■□□□ 1.29
HDAC10-215ENST00000488270 NPM3O75607 178 aaKnown RBP23.14■■□□□ 1.29
HDAC10-215ENST00000488270 TRPA1O75762 1119 aa23.14■■□□□ 1.29
HDAC10-215ENST00000488270 IFIT2P09913 472 aaKnown RBP23.14■■□□□ 1.29
HDAC10-215ENST00000488270 ZBTB48P10074 688 aaPredicted RBP23.14■■□□□ 1.29
HDAC10-215ENST00000488270 PPP4CP60510 307 aa23.14■■□□□ 1.29
HDAC10-215ENST00000488270 NAA16Q6N069 864 aaPredicted RBP23.14■■□□□ 1.29
HDAC10-215ENST00000488270 CNKSR2Q8WXI2 1034 aa23.14■■□□□ 1.29
HDAC10-215ENST00000488270 HOOK2Q96ED9 719 aa23.14■■□□□ 1.29
HDAC10-215ENST00000488270 ZNF112Q9UJU3 913 aa23.14■■□□□ 1.29
HDAC10-215ENST00000488270 DDTLA6NHG4 134 aaPredicted RBP23.13■■□□□ 1.29
HDAC10-215ENST00000488270 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
HDAC10-215ENST00000488270 MAP4K4O95819 1239 aaPredicted RBP23.13■■□□□ 1.29
HDAC10-215ENST00000488270 MAP3K10Q02779 954 aa23.13■■□□□ 1.29
HDAC10-215ENST00000488270 ZKSCAN4Q969J2 545 aaPredicted RBP23.13■■□□□ 1.29
HDAC10-215ENST00000488270 LRRCC1Q9C099 1032 aa23.13■■□□□ 1.29
HDAC10-215ENST00000488270 ELP3Q9H9T3 547 aa23.13■■□□□ 1.29
HDAC10-215ENST00000488270 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.13■■□□□ 1.29
HDAC10-215ENST00000488270 DCAF15Q66K64 600 aa23.12■■□□□ 1.29
HDAC10-215ENST00000488270 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.12■■□□□ 1.29
HDAC10-215ENST00000488270 SNCAIPQ9Y6H5 919 aa23.12■■□□□ 1.29
HDAC10-215ENST00000488270 SLURP2P0DP57 97 aa23.11■■□□□ 1.29
HDAC10-215ENST00000488270 SH3RF3Q8TEJ3 882 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms