RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 NFIAQ12857 509 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 MTX1Q13505 466 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 RASGRF1Q13972 1273 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 ZKSCAN4Q969J2 545 aaPredicted RBP13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 USP40Q9NVE5 1235 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 AKAP2Q9Y2D5 859 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 CSADQ9Y600 493 aa13.99□□□□□ -0.17
NIPAL3-207ENST00000488155 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 SOX10P56693 466 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 FAM83AQ86UY5 434 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 ITPRIPQ8IWB1 547 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 WRNIP1Q96S55 665 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 PTPN18Q99952 460 aa13.98□□□□□ -0.17
NIPAL3-207ENST00000488155 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 SEMA3EO15041 775 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 RLBP1P12271 317 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 PI16Q6UXB8 463 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 ZFPM1Q8IX07 1006 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 FAM151AQ8WW52 585 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 ZSWIM8A7E2V4 1837 aa13.97□□□□□ -0.17
NIPAL3-207ENST00000488155 SALL1Q9NSC2 1324 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 CCL15-CCL14A0A0B4J2E2 113 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 INPP5BP32019 993 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 MLLT1Q03111 559 aaPredicted RBP13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 CRHR2Q13324 411 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 OS9Q13438 667 aaPredicted RBP13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 MVPQ14764 893 aaKnown RBP13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 CCL15Q16663 113 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 TBC1D9Q6ZT07 1266 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 ZGPATQ8N5A5 531 aaKnown RBP13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 BRI3BPQ8WY22 251 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 MS4A4AQ96JQ5 239 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 FAM198AQ9UFP1 575 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 HPS5Q9UPZ3 1129 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 SNCAIPQ9Y6H5 919 aa13.96□□□□□ -0.17
NIPAL3-207ENST00000488155 PTPRFP10586 1907 aa13.96□□□□□ -0.18
NIPAL3-207ENST00000488155 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 DCAF15Q66K64 600 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 ERICH6Q7L0X2 663 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 CFHR5Q9BXR6 569 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 ZNF341Q9BYN7 854 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 HMG20BQ9P0W2 317 aa13.95□□□□□ -0.18
NIPAL3-207ENST00000488155 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 SPDYE5A6NIY4 337 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 BTDP43251 543 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 RGS3P49796 1198 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 PICALMQ13492 652 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 NOM1Q5C9Z4 860 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 ZSCAN29Q8IWY8 852 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 CD99L2Q8TCZ2 262 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 HOOK2Q96ED9 719 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 TRIM17Q9Y577 477 aa13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 RPAP1Q9BWH6 1393 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-207ENST00000488155 IRF6O14896 467 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 SLURP2P0DP57 97 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 RGS19P49795 217 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 GTF2A2P52657 109 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 MECOMQ03112 1051 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 POLA2Q14181 598 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 TAF1CQ15572 869 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 PKN2Q16513 984 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 SPTY2D1Q68D10 685 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 ERO1BQ86YB8 467 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 FAM43AQ8N2R8 423 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 SSH3Q8TE77 659 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 SNRKQ9NRH2 765 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 RAI14Q9P0K7 980 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 DOCK1Q14185 1865 aa13.93□□□□□ -0.18
NIPAL3-207ENST00000488155 GAKO14976 1311 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 PHIPQ8WWQ0 1821 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 MYH1P12882 1939 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 MCAMP43121 646 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 FBXO46Q6PJ61 603 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 DBNDD2Q9BQY9 259 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 MGAMO43451 1857 aa13.92□□□□□ -0.18
NIPAL3-207ENST00000488155 MROH7-TTC4A0A0A0MT08 1334 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 BTBD19C9JJ37 291 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 ARID4AP29374 1257 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 CAP1Q01518 475 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 SP3Q02447 781 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 TNNI3KQ59H18 835 aa13.91□□□□□ -0.18
NIPAL3-207ENST00000488155 TTC39AQ5SRH9 613 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms