RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 JCADQ9P266 1359 aa13.35□□□□□ -0.27
LDLRAP1-207ENST00000488127 SNX21Q969T3 373 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 SCLT1Q96NL6 688 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 RAD50Q92878 1312 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 PDE8BO95263 885 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 UBA7P41226 1012 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 RBM25P49756 843 aaKnown RBP13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 GSDMDP57764 484 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 SUSD4Q5VX71 490 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 RAB34Q9BZG1 259 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 CPSF1Q10570 1443 aaKnown RBP13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 LIG1P18858 919 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 ARHGAP27Q6ZUM4 889 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 KIF5CO60282 957 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 GTF2A1P52655 376 aaPredicted RBP13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 CNNM3Q8NE01 707 aa13.34□□□□□ -0.27
LDLRAP1-207ENST00000488127 RNF123Q5XPI4 1314 aa13.33□□□□□ -0.27
LDLRAP1-207ENST00000488127 SLC27A2O14975 620 aa13.33□□□□□ -0.27
LDLRAP1-207ENST00000488127 IQCEQ6IPM2 695 aa13.33□□□□□ -0.27
LDLRAP1-207ENST00000488127 RUFY3Q7L099 469 aa13.33□□□□□ -0.27
LDLRAP1-207ENST00000488127 COPRSQ9NQ92 184 aa13.33□□□□□ -0.27
LDLRAP1-207ENST00000488127 GNAQP50148 359 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 TMC6Q7Z403 805 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 TAX1BP1Q86VP1 789 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 PTCH1Q13635 1447 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 SNAP23O00161 211 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 MARCKSP29966 332 aaPredicted RBP13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 TNNI2P48788 182 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 ZSWIM4Q9H7M6 989 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 USP31Q70CQ4 1352 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 MNAT1P51948 309 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
LDLRAP1-207ENST00000488127 ERLIN2O94905 339 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 GSPT1P15170 499 aaKnown RBP13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 DLGAP5Q15398 846 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 TXLNBQ8N3L3 684 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 CCDC148Q8NFR7 591 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 SDR42E1Q8WUS8 393 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 ZSCAN22P10073 491 aaPredicted RBP13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 MAP9Q49MG5 647 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 CNKSR1Q969H4 720 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 ZNF804BA4D1E1 1349 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 RIMS1Q86UR5 1692 aaKnown RBP13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 A0A0D9SFI3 127 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 PTPDC1A2A3K4 754 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 KIAA1328Q86T90 577 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 FAM107BQ9H098 131 aa13.32□□□□□ -0.28
LDLRAP1-207ENST00000488127 CTAGE5O15320 804 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 KIF20AO95235 890 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 USP17L21D6R901 530 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 SKILP12757 684 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 RPS6KA4O75676 772 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 USP40Q9NVE5 1235 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 SNX14Q9Y5W7 946 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 GPR101Q96P66 508 aaPredicted RBP13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
LDLRAP1-207ENST00000488127 PDE6AP16499 860 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 DNM1Q05193 864 aaKnown RBP13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 DBNDD1Q9H9R9 158 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 ZBTB7AO95365 584 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 ATP2B4P23634 1241 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 EAPPQ56P03 285 aaPredicted RBP13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 FAM47AQ5JRC9 791 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 TBC1D22AQ8WUA7 517 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 EHMT1Q9H9B1 1298 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 GNG11P61952 73 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
LDLRAP1-207ENST00000488127 CRB1P82279 1406 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 RBSNQ9H1K0 784 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 ARFGAP3Q9NP61 516 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 IBTKQ9P2D0 1353 aaPredicted RBP13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 TEKT1Q969V4 418 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 OGFRQ9NZT2 677 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 SLU7O95391 586 aaKnown RBP13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 PTPN12Q05209 780 aaKnown RBP13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 SYCP1Q15431 976 aa13.29□□□□□ -0.28
LDLRAP1-207ENST00000488127 STX1AQ16623 288 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms