RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
COPS7B-221ENST00000488111 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
COPS7B-221ENST00000488111 LTBP1Q14766 1721 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 RAD50Q92878 1312 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 CTIFO43310 598 aaKnown RBP16.11■□□□□ 0.17
COPS7B-221ENST00000488111 NEK4P51957 841 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 APPBP2Q92624 585 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 G3V3G9 751 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 IL1R1P14778 569 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 PRDX5P30044 214 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 CCDC183Q5T5S1 534 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 TAF3Q5VWG9 929 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 EYA3Q99504 573 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 DBNDD1Q9H9R9 158 aa16.11■□□□□ 0.17
COPS7B-221ENST00000488111 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
COPS7B-221ENST00000488111 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
COPS7B-221ENST00000488111 DALRD3Q5D0E6 543 aaKnown RBP16.1■□□□□ 0.17
COPS7B-221ENST00000488111 KIAA1524Q8TCG1 905 aa16.1■□□□□ 0.17
COPS7B-221ENST00000488111 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
COPS7B-221ENST00000488111 PALD1Q9ULE6 856 aa16.1■□□□□ 0.17
COPS7B-221ENST00000488111 MYO5AQ9Y4I1 1855 aaKnown RBP16.1■□□□□ 0.17
COPS7B-221ENST00000488111 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 GRIK5Q16478 980 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 AOC3Q16853 763 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 CC2D2BQ6DHV5 1058 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 USP48Q86UV5 1035 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
COPS7B-221ENST00000488111 GTF2IP78347 998 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 FEZ1Q99689 392 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
COPS7B-221ENST00000488111 COA1Q9GZY4 146 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
COPS7B-221ENST00000488111 KDM4AO75164 1064 aa16.08■□□□□ 0.17
COPS7B-221ENST00000488111 ADGRA1Q86SQ6 560 aa16.08■□□□□ 0.17
COPS7B-221ENST00000488111 TICAM2Q86XR7 235 aa16.08■□□□□ 0.17
COPS7B-221ENST00000488111 ZNF384Q8TF68 577 aa16.08■□□□□ 0.17
COPS7B-221ENST00000488111 KCNQ5Q9NR82 932 aa16.08■□□□□ 0.17
COPS7B-221ENST00000488111 GPAA1O43292 621 aa16.08■□□□□ 0.16
COPS7B-221ENST00000488111 CYP7A1P22680 504 aa16.08■□□□□ 0.16
COPS7B-221ENST00000488111 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
COPS7B-221ENST00000488111 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
COPS7B-221ENST00000488111 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
COPS7B-221ENST00000488111 RBM8AQ9Y5S9 174 aaKnown RBP16.08■□□□□ 0.16
COPS7B-221ENST00000488111 SNED1Q8TER0 1413 aa16.08■□□□□ 0.16
COPS7B-221ENST00000488111 PDS5AQ29RF7 1337 aaKnown RBP16.08■□□□□ 0.16
COPS7B-221ENST00000488111 TPM3P06753 285 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■□□ 16.3
COPS7B-221ENST00000488111 MECOMQ03112 1051 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 IL17RAQ96F46 866 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 DLEC1Q9Y238 1755 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 MCCP23508 829 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 HSPA4P34932 840 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
COPS7B-221ENST00000488111 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 KCNF1Q9H3M0 494 aa16.07■□□□□ 0.16
COPS7B-221ENST00000488111 ZNF277Q9NRM2 450 aaPredicted RBP16.07■□□□□ 0.16
COPS7B-221ENST00000488111 WDR33Q9C0J8 1336 aaKnown RBP16.07■□□□□ 0.16
COPS7B-221ENST00000488111 PPIP5K2O43314 1243 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 HSPD1P10809 573 aaKnown RBP16.06■□□□□ 0.16
COPS7B-221ENST00000488111 ANAPC15P60006 121 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-221ENST00000488111 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 KIAA1551Q9HCM1 1747 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 RPAP1Q9BWH6 1393 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-221ENST00000488111 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
COPS7B-221ENST00000488111 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-221ENST00000488111 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-221ENST00000488111 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 OGFRQ9NZT2 677 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 PYCARDQ9ULZ3 195 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 UTRNP46939 3433 aa16.06■□□□□ 0.16
COPS7B-221ENST00000488111 ECE2O60344 883 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 MBD4O95243 580 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 SYCP1Q15431 976 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 DZIP1Q86YF9 867 aaKnown RBP16.05■□□□□ 0.16
COPS7B-221ENST00000488111 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 NECTIN1Q15223 517 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 FUCA2Q9BTY2 467 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 SALL1Q9NSC2 1324 aa16.05■□□□□ 0.16
COPS7B-221ENST00000488111 ZBTB22O15209 634 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 FOXP2O15409 715 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 DIXDC1Q155Q3 683 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
COPS7B-221ENST00000488111 PODNQ7Z5L7 613 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 LCORLQ8N3X6 602 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
COPS7B-221ENST00000488111 EPB41L2O43491 1005 aaKnown RBP16.04■□□□□ 0.16
COPS7B-221ENST00000488111 DYNLL1P63167 89 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms