RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CTSBP07858 339 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 BMP6P22004 513 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 C9orf131Q5VYM1 1079 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 AGGF1Q8N302 714 aaeCLIP6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 LENG1Q96BZ8 264 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 AKTIPQ9H8T0 292 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 RAD18Q9NS91 495 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 KBTBD4Q9NVX7 518 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 CYP8B1Q9UNU6 501 aa6.34□□□□□ -1.39
ECHDC1-217ENST00000488087 KRBA1A5PL33 1030 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 RANGAP1P46060 587 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 HDLBPQ00341 1268 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 EXOSC6Q5RKV6 272 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 RASIP1Q5U651 963 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 NUTM2GQ5VZR2 741 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 KIAA1211Q6ZU35 1233 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 PDZD3Q86UT5 571 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 GRIN3AQ8TCU5 1115 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 RSRP1Q9BUV0 290 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 RNF208Q9H0X6 261 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 CCDC86Q9H6F5 360 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 COPRSQ9NQ92 184 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 TLR6Q9Y2C9 796 aa6.33□□□□□ -1.4
ECHDC1-217ENST00000488087 ALX3O95076 343 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 DLGAP3O95886 979 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 GLB1P16278 677 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 LIG1P18858 919 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 IREB2P48200 963 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 ZNF252P-AS1Q0IIN9 211 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 DIEXFQ68CQ4 756 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 FDX2Q6P4F2 183 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 AGMOQ6ZNB7 445 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 ERMP1Q7Z2K6 904 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 USP48Q86UV5 1035 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 NT5DC4Q86YG4 428 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 TMEM130Q8N3G9 435 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 PHC3Q8NDX5 983 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 CYP4F12Q9HCS2 524 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
ECHDC1-217ENST00000488087 TRIM37O94972 964 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 FURINP09958 794 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 CHRNA4P43681 627 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 MBTPS1Q14703 1052 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 ZNF394Q53GI3 561 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 AKAP4Q5JQC9 854 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 MPRIPQ6WCQ1 1025 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 C12orf50Q8NA57 414 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 GPBAR1Q8TDU6 330 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 MIR1-1HGQ9H1L0 117 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 PCDHB5Q9Y5E4 795 aa6.31□□□□□ -1.4
ECHDC1-217ENST00000488087 C1QTNF9BB2RNN3 333 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 SART1O43290 800 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 AOC2O75106 756 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 PF4P02776 101 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 TFE3P19532 575 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 FAM160A1Q05DH4 1040 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 SEPT6Q14141 434 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 ADGRE1Q14246 886 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 ANKRD34AQ69YU3 496 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 CD163Q86VB7 1156 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 METTL16Q86W50 562 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 JARID2Q92833 1246 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 WDR89Q96FK6 387 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 WDR18Q9BV38 432 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 TMPRSS13Q9BYE2 586 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 CEP41Q9BYV8 373 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 PCDHA4Q9UN74 947 aa6.3□□□□□ -1.4
ECHDC1-217ENST00000488087 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 ZNF862O60290 1169 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 NOS3P29474 1203 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 CAMK2GQ13555 558 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 TXNRD3Q86VQ6 643 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 TRIM42Q8IWZ5 723 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 RHOVQ96L33 236 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 AP4E1Q9UPM8 1137 aa6.29□□□□□ -1.4
ECHDC1-217ENST00000488087 GAS2O43903 313 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 DRD2P14416 443 aa6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 EIF4A3P38919 411 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 LMNB2Q03252 620 aa6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 ZNF654Q8IZM8 581 aa6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 SMG8Q8ND04 991 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 CCSER2Q9H7U1 834 aa6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 SUGCTQ9HAC7 445 aa6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-217ENST00000488087 BPNT1O95861 308 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 ADH5P11766 374 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 GATA4P43694 442 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 PREPP48147 710 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 ID3Q02535 119 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms