RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-216	ENST00000488085	SIRT2	Q8IXJ6	389 aa		10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	ZNF384	Q8TF68	577 aa		10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	BEGAIN	Q9BUH8	593 aa		10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	SAGE1	Q9NXZ1	904 aa		10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	RFX7	Q2KHR2	1363 aa		10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	SIPA1L1	O43166	1804 aa		10.84	□□□□□ -0.67
PSMD2-216	ENST00000488085	UQCRFS1P1	P0C7P4	283 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	CACNB3	P54284	484 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	OS9	Q13438	667 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	PRKG1	Q13976	671 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	CDC42EP5	Q6NZY7	148 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	PI16	Q6UXB8	463 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	SPATA5	Q8NB90	893 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	EAF2	Q96CJ1	260 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	DBNDD2	Q9BQY9	259 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	CHMP4B	Q9H444	224 aa	Known RBP	10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	TMOD2	Q9NZR1	351 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	DBNL	Q9UJU6	430 aa	Known RBP	10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	DOCK1	Q14185	1865 aa		10.83	□□□□□ -0.68
PSMD2-216	ENST00000488085	IREB2	P48200	963 aa	Known RBP	10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	TM4SF4	P48230	202 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	GORAB	Q5T7V8	394 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	SPRYD7	Q5W111	196 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	ERC1	Q8IUD2	1116 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	FAM151A	Q8WW52	585 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	CLMN	Q96JQ2	1002 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	RNF186	Q9NXI6	227 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	ABCF2	Q9UG63	623 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	EXOC6B	Q9Y2D4	811 aa		10.82	□□□□□ -0.68
PSMD2-216	ENST00000488085	GPR75-ASB3	A0A0A6YYF3	556 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	IGSF3	O75054	1194 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	ZBTB48	P10074	688 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	MECOM	Q03112	1051 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	NFIA	Q12857	509 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	HSP90AB4P	Q58FF6	505 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	CCDC158	Q5M9N0	1113 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	TBC1D9	Q6ZT07	1266 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	ERICH6	Q7L0X2	663 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	DZIP1	Q86YF9	867 aa	Known RBP	10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	SLF2	Q8IX21	1173 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	ANKRD13A	Q8IZ07	590 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	RHPN1	Q8TCX5	695 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	NSUN4	Q96CB9	384 aa	Known RBP	10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	SLC10A4	Q96EP9	437 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	IDI2	Q9BXS1	227 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	FAM198A	Q9UFP1	575 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	TSKS	Q9UJT2	592 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	MROH7-TTC4	A0A0A0MT08	1334 aa		10.81	□□□□□ -0.68
PSMD2-216	ENST00000488085	HMMR	O75330	724 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	WDHD1	O75717	1129 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	CAPN15	O75808	1086 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	CYP2E1	P05181	493 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	GJA5	P36382	358 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	TTC39A	Q5SRH9	613 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	TNS4	Q8IZW8	715 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	WNK4	Q96J92	1243 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	USP40	Q9NVE5	1235 aa		10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	TLR7	Q9NYK1	1049 aa	Known RBP	10.8	□□□□□ -0.68
PSMD2-216	ENST00000488085	ATRNL1	Q5VV63	1379 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	NPM3	O75607	178 aa	Known RBP	10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	TRPA1	O75762	1119 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	MAP4K4	O95819	1239 aa	Predicted RBP	10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	INHBE	P58166	350 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	RHBDL3	P58872	404 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	MAP3K9	P80192	1104 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	HOOK2	Q96ED9	719 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	CFHR5	Q9BXR6	569 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	MYH8	P13535	1937 aa		10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	COL2A1	P02458	1487 aa	Predicted RBP	10.79	□□□□□ -0.68
PSMD2-216	ENST00000488085	DDX60L	Q5H9U9	1706 aa	Known RBP	10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	TESPA1	A2RU30	521 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	MANSC4	A6NHS7	340 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	RAB11FIP3	O75154	756 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	ENTPD3	O75355	529 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	LDHC	P07864	332 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	BTD	P43251	543 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	ZAP70	P43403	619 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	RGS3	P49796	1198 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	GSTO1	P78417	241 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	MAP3K10	Q02779	954 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	SREBF2	Q12772	1141 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	TCP10	Q12799	353 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	VGLL4	Q14135	290 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	DCAF15	Q66K64	600 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	ZFPM1	Q8IX07	1006 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	KIF1BP	Q96EK5	621 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	SNRK	Q9NRH2	765 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	ZNF112	Q9UJU3	913 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	NAV1	Q8NEY1	1877 aa		10.78	□□□□□ -0.68
PSMD2-216	ENST00000488085	MGAM	O43451	1857 aa		10.77	□□□□□ -0.69
PSMD2-216	ENST00000488085	PPP4C	P60510	307 aa		10.77	□□□□□ -0.69
PSMD2-216	ENST00000488085	MKRN3	Q13064	507 aa	Known RBP	10.77	□□□□□ -0.69
PSMD2-216	ENST00000488085	NOM1	Q5C9Z4	860 aa	Known RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms