RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
NUP188-207ENST00000487952 HELLSQ9NRZ9 838 aa16.91■□□□□ 0.3
NUP188-207ENST00000487952 USP40Q9NVE5 1235 aa16.91■□□□□ 0.3
NUP188-207ENST00000487952 PCDHAC2Q9Y5I4 1007 aa16.91■□□□□ 0.3
NUP188-207ENST00000487952 WNT10BO00744 389 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 MBD4O95243 580 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 CHMLP26374 656 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 APOBEC3HQ6NTF7 200 aaKnown RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 PRMT6Q96LA8 375 aaPredicted RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 TDRD3Q9H7E2 651 aaKnown RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
NUP188-207ENST00000487952 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
NUP188-207ENST00000487952 A0A0D9SFI3 127 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 POTECB2RU33 542 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 EGFRP00533 1210 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 PPP4CP60510 307 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 NBPF9Q3BBW0 867 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 TEX11Q8IYF3 940 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 ZBED3Q96IU2 234 aaPredicted RBP16.89■□□□□ 0.29
NUP188-207ENST00000487952 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
NUP188-207ENST00000487952 PUS7LQ9H0K6 701 aaKnown RBP16.89■□□□□ 0.29
NUP188-207ENST00000487952 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
NUP188-207ENST00000487952 MYH7P12883 1935 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 M0R2C6 588 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 GPAA1O43292 621 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 USP5P45974 858 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
NUP188-207ENST00000487952 RIOK1Q9BRS2 568 aaKnown RBP16.88■□□□□ 0.29
NUP188-207ENST00000487952 ARMT1Q9H993 441 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 ZNF70Q9UC06 446 aaPredicted RBP16.88■□□□□ 0.29
NUP188-207ENST00000487952 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 SCN4AP35499 1836 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 RAD50Q92878 1312 aa16.88■□□□□ 0.29
NUP188-207ENST00000487952 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
NUP188-207ENST00000487952 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
NUP188-207ENST00000487952 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
NUP188-207ENST00000487952 GGA3Q9NZ52 723 aa16.87■□□□□ 0.29
NUP188-207ENST00000487952 GNAT2P19087 354 aa16.86■□□□□ 0.29
NUP188-207ENST00000487952 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
NUP188-207ENST00000487952 RHBDL3P58872 404 aa16.86■□□□□ 0.29
NUP188-207ENST00000487952 CCDC129Q6ZRS4 1044 aa16.86■□□□□ 0.29
NUP188-207ENST00000487952 APOBEC3FQ8IUX4 373 aaKnown RBP16.86■□□□□ 0.29
NUP188-207ENST00000487952 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
NUP188-207ENST00000487952 SLC4A4Q9Y6R1 1079 aa16.86■□□□□ 0.29
NUP188-207ENST00000487952 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
NUP188-207ENST00000487952 ADAMTSL1Q8N6G6 1762 aa16.86■□□□□ 0.29
NUP188-207ENST00000487952 TNNI2P48788 182 aa16.85■□□□□ 0.29
NUP188-207ENST00000487952 CACNB3P54284 484 aa16.85■□□□□ 0.29
NUP188-207ENST00000487952 PICALMQ13492 652 aa16.85■□□□□ 0.29
NUP188-207ENST00000487952 TNFAIP1Q13829 316 aa16.85■□□□□ 0.29
NUP188-207ENST00000487952 ANGEL2Q5VTE6 544 aaKnown RBP16.85■□□□□ 0.29
NUP188-207ENST00000487952 ZC3H15Q8WU90 426 aaKnown RBP16.85■□□□□ 0.29
NUP188-207ENST00000487952 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
NUP188-207ENST00000487952 STRBPQ96SI9 672 aaKnown RBP16.85■□□□□ 0.29
NUP188-207ENST00000487952 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
NUP188-207ENST00000487952 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
NUP188-207ENST00000487952 APPP05067 770 aa16.84■□□□□ 0.29
NUP188-207ENST00000487952 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
NUP188-207ENST00000487952 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
NUP188-207ENST00000487952 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
NUP188-207ENST00000487952 NACAP1Q9BZK3 213 aa16.84■□□□□ 0.29
NUP188-207ENST00000487952 ASTN2O75129 1339 aaPredicted RBP16.84■□□□□ 0.29
NUP188-207ENST00000487952 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
NUP188-207ENST00000487952 SGSM2O43147 1006 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 EIF5BO60841 1220 aaKnown RBP16.83■□□□□ 0.28
NUP188-207ENST00000487952 WDHD1O75717 1129 aaPredicted RBP16.83■□□□□ 0.28
NUP188-207ENST00000487952 FKBP1CQ5VVH2 108 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 SULF1Q8IWU6 871 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 IDI2Q9BXS1 227 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 ATP8A2Q9NTI2 1148 aa16.83■□□□□ 0.28
NUP188-207ENST00000487952 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
NUP188-207ENST00000487952 PRKAB2O43741 272 aa16.82■□□□□ 0.28
NUP188-207ENST00000487952 ENTPD3O75355 529 aa16.82■□□□□ 0.28
NUP188-207ENST00000487952 TDO2P48775 406 aa16.82■□□□□ 0.28
NUP188-207ENST00000487952 TCP10Q12799 353 aa16.82■□□□□ 0.28
NUP188-207ENST00000487952 NFIAQ12857 509 aa16.82■□□□□ 0.28
NUP188-207ENST00000487952 AMOTL1Q8IY63 956 aa16.82■□□□□ 0.28
NUP188-207ENST00000487952 FLT1P17948 1338 aa16.81■□□□□ 0.28
NUP188-207ENST00000487952 PATL2C9JE40 543 aaKnown RBP16.81■□□□□ 0.28
NUP188-207ENST00000487952 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
NUP188-207ENST00000487952 KRT26Q7Z3Y9 468 aa16.81■□□□□ 0.28
NUP188-207ENST00000487952 FAM83AQ86UY5 434 aa16.81■□□□□ 0.28
NUP188-207ENST00000487952 ZSCAN29Q8IWY8 852 aaPredicted RBP16.81■□□□□ 0.28
NUP188-207ENST00000487952 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
NUP188-207ENST00000487952 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
NUP188-207ENST00000487952 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms