RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 RFC4P35249 363 aa26.57■■□□□ 1.84
LRRC1-203ENST00000487251 HS1BP3Q53T59 392 aa26.57■■□□□ 1.84
LRRC1-203ENST00000487251 VPS37DQ86XT2 251 aa26.57■■□□□ 1.84
LRRC1-203ENST00000487251 SCAND2PQ9GZW5 306 aaPredicted RBP26.57■■□□□ 1.84
LRRC1-203ENST00000487251 GJB4Q9NTQ9 266 aa26.57■■□□□ 1.84
LRRC1-203ENST00000487251 NAA16Q6N069 864 aaPredicted RBP26.57■■□□□ 1.84
LRRC1-203ENST00000487251 TFCP2L1Q9NZI6 479 aa26.57■■□□□ 1.84
LRRC1-203ENST00000487251 SH2B2O14492 632 aaPredicted RBP26.56■■□□□ 1.84
LRRC1-203ENST00000487251 RGL2O15211 777 aa26.56■■□□□ 1.84
LRRC1-203ENST00000487251 PGBD1Q96JS3 809 aa26.56■■□□□ 1.84
LRRC1-203ENST00000487251 ZSCAN16Q9H4T2 348 aaPredicted RBP26.56■■□□□ 1.84
LRRC1-203ENST00000487251 ANGEL1Q9UNK9 670 aaKnown RBP26.56■■□□□ 1.84
LRRC1-203ENST00000487251 NPHP1O15259 732 aa26.56■■□□□ 1.84
LRRC1-203ENST00000487251 ZNF500O60304 480 aaPredicted RBP26.56■■□□□ 1.84
LRRC1-203ENST00000487251 ADD1P35611 737 aaKnown RBP26.56■■□□□ 1.84
LRRC1-203ENST00000487251 TDO2P48775 406 aa26.56■■□□□ 1.84
LRRC1-203ENST00000487251 CAVIN4Q5BKX8 364 aa26.56■■□□□ 1.84
LRRC1-203ENST00000487251 SDR42E1Q8WUS8 393 aa26.56■■□□□ 1.84
LRRC1-203ENST00000487251 BAZ2AQ9UIF9 1905 aaKnown RBP26.56■■□□□ 1.84
LRRC1-203ENST00000487251 WDR19Q8NEZ3 1342 aa26.55■■□□□ 1.84
LRRC1-203ENST00000487251 SMIM22K7EJ46 135 aa26.55■■□□□ 1.84
LRRC1-203ENST00000487251 TRAPPC3LQ5T215 181 aa26.55■■□□□ 1.84
LRRC1-203ENST00000487251 GNL3LQ9NVN8 582 aaKnown RBP26.55■■□□□ 1.84
LRRC1-203ENST00000487251 FAM13BQ9NYF5 915 aa26.55■■□□□ 1.84
LRRC1-203ENST00000487251 TM4SF1P30408 202 aa26.55■■□□□ 1.84
LRRC1-203ENST00000487251 ILDR1Q86SU0 546 aaPredicted RBP26.55■■□□□ 1.84
LRRC1-203ENST00000487251 CCDC144CPQ8IYA2 1237 aa26.55■■□□□ 1.84
LRRC1-203ENST00000487251 KDM4AO75164 1064 aa26.54■■□□□ 1.84
LRRC1-203ENST00000487251 ZNF384Q8TF68 577 aa26.54■■□□□ 1.84
LRRC1-203ENST00000487251 ZMYM6O95789 1325 aa26.54■■□□□ 1.84
LRRC1-203ENST00000487251 PNPLA7Q6ZV29 1317 aa26.54■■□□□ 1.84
LRRC1-203ENST00000487251 MYL10Q9BUA6 226 aa26.54■■□□□ 1.84
LRRC1-203ENST00000487251 KIF3AQ9Y496 699 aa26.54■■□□□ 1.84
LRRC1-203ENST00000487251 ONECUT3O60422 494 aaPredicted RBP26.53■■□□□ 1.84
LRRC1-203ENST00000487251 RRP12Q5JTH9 1297 aaKnown RBP26.53■■□□□ 1.84
LRRC1-203ENST00000487251 IGDCC4Q8TDY8 1250 aa26.53■■□□□ 1.84
LRRC1-203ENST00000487251 ZSWIM5Q9P217 1185 aa26.53■■□□□ 1.84
LRRC1-203ENST00000487251 ORC3Q9UBD5 711 aaPredicted RBP26.53■■□□□ 1.84
LRRC1-203ENST00000487251 TAOK2Q9UL54 1235 aa26.53■■□□□ 1.84
LRRC1-203ENST00000487251 TRPC5Q9UL62 973 aaPredicted RBP26.53■■□□□ 1.84
LRRC1-203ENST00000487251 TIAM2Q8IVF5 1701 aa26.53■■□□□ 1.84
LRRC1-203ENST00000487251 NFIXQ14938 502 aa26.53■■□□□ 1.84
LRRC1-203ENST00000487251 CAMK4Q16566 473 aa26.53■■□□□ 1.84
LRRC1-203ENST00000487251 CPLX1O14810 134 aa26.52■■□□□ 1.84
LRRC1-203ENST00000487251 DYNLL1P63167 89 aaKnown RBP26.52■■□□□ 1.84
LRRC1-203ENST00000487251 TXNRD3Q86VQ6 643 aa26.52■■□□□ 1.84
LRRC1-203ENST00000487251 JAG2Q9Y219 1238 aa26.52■■□□□ 1.84
LRRC1-203ENST00000487251 ECM29Q5VYK3 1845 aa26.52■■□□□ 1.84
LRRC1-203ENST00000487251 MICU3Q86XE3 530 aa26.51■■□□□ 1.84
LRRC1-203ENST00000487251 ZKSCAN3Q9BRR0 538 aa26.51■■□□□ 1.84
LRRC1-203ENST00000487251 LY9Q9HBG7 655 aa26.51■■□□□ 1.84
LRRC1-203ENST00000487251 GOLGA6L4A6NEF3 574 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 CDC27P30260 824 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 AKNAD1Q5T1N1 836 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 APOA5Q6Q788 366 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 FBXO33Q7Z6M2 555 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 USP28Q96RU2 1077 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 TOMM22Q9NS69 142 aa26.51■■□□□ 1.83
LRRC1-203ENST00000487251 UQCRHLA0A096LP55 91 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 UQCRHP07919 91 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 DACT1Q9NYF0 836 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 UBR3Q6ZT12 1888 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 MAGEB6P1A0A0J9YX57 407 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 TMEM67Q5HYA8 995 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 AIFM3Q96NN9 605 aa26.5■■□□□ 1.83
LRRC1-203ENST00000487251 GNAT2P19087 354 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 METAP2P50579 478 aaKnown RBP eCLIP26.49■■□□□ 1.83
LRRC1-203ENST00000487251 FUCA2Q9BTY2 467 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 NACAP1Q9BZK3 213 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 BRWD3Q6RI45 1802 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.49■■□□□ 1.83
LRRC1-203ENST00000487251 DHX16O60231 1041 aaKnown RBP26.49■■□□□ 1.83
LRRC1-203ENST00000487251 NFXL1Q6ZNB6 911 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 MFSD6Q6ZSS7 791 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 C8orf76Q96K31 380 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 BCL11BQ9C0K0 894 aaPredicted RBP26.49■■□□□ 1.83
LRRC1-203ENST00000487251 ZKSCAN5Q9Y2L8 839 aa26.49■■□□□ 1.83
LRRC1-203ENST00000487251 MYH2Q9UKX2 1941 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 LETM1O95202 739 aaPredicted RBP26.48■■□□□ 1.83
LRRC1-203ENST00000487251 RIOK1Q9BRS2 568 aaKnown RBP26.48■■□□□ 1.83
LRRC1-203ENST00000487251 QTRT2Q9H974 415 aaKnown RBP26.48■■□□□ 1.83
LRRC1-203ENST00000487251 MINDY4BA8MYZ0 360 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 NR1I2O75469 434 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 CHAF1AQ13111 956 aaPredicted RBP26.48■■□□□ 1.83
LRRC1-203ENST00000487251 BICD2Q8TD16 824 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 PHKBQ93100 1093 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 TMEM87BQ96K49 555 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 CFAP45Q9UL16 551 aa26.48■■□□□ 1.83
LRRC1-203ENST00000487251 IFIT3O14879 490 aaKnown RBP26.47■■□□□ 1.83
LRRC1-203ENST00000487251 CYP2D7A0A087X1C5 515 aa26.46■■□□□ 1.83
LRRC1-203ENST00000487251 HIBADHP31937 336 aaKnown RBP26.46■■□□□ 1.83
LRRC1-203ENST00000487251 STAG1Q8WVM7 1258 aa26.46■■□□□ 1.83
LRRC1-203ENST00000487251 CHMP4CQ96CF2 233 aa26.46■■□□□ 1.83
LRRC1-203ENST00000487251 NUP62CLQ9H1M0 184 aa26.46■■□□□ 1.83
LRRC1-203ENST00000487251 UBE2Q2LH0YL09 131 aa26.46■■□□□ 1.83
LRRC1-203ENST00000487251 PPARAQ07869 468 aa26.46■■□□□ 1.83
LRRC1-203ENST00000487251 POLR3DP05423 398 aaPredicted RBP26.45■■□□□ 1.83
LRRC1-203ENST00000487251 CKAP2LQ8IYA6 745 aa26.45■■□□□ 1.83
LRRC1-203ENST00000487251 CNBD1Q8NA66 436 aa26.45■■□□□ 1.83
LRRC1-203ENST00000487251 FBXO18Q8NFZ0 1043 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms