RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 ARHGEF6Q15052 776 aa17.98■□□□□ 0.47
SDCCAG3-211ENST00000486441 MTFR1Q15390 333 aa17.98■□□□□ 0.47
SDCCAG3-211ENST00000486441 METTL24Q5JXM2 366 aa17.98■□□□□ 0.47
SDCCAG3-211ENST00000486441 USP44Q9H0E7 712 aa17.98■□□□□ 0.47
SDCCAG3-211ENST00000486441 SUGT1Q9Y2Z0 365 aa17.98■□□□□ 0.47
SDCCAG3-211ENST00000486441 PPATQ06203 517 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 CAVIN4Q5BKX8 364 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 UBE2Q1Q7Z7E8 422 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 VPS37DQ86XT2 251 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 TRIM47Q96LD4 638 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 KCNH4Q9UQ05 1017 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 KIF16BQ96L93 1317 aa17.97■□□□□ 0.47
SDCCAG3-211ENST00000486441 RPAP1Q9BWH6 1393 aaPredicted RBP17.96■□□□□ 0.47
SDCCAG3-211ENST00000486441 NFIAQ12857 509 aa17.96■□□□□ 0.47
SDCCAG3-211ENST00000486441 CPA4Q9UI42 421 aa17.96■□□□□ 0.47
SDCCAG3-211ENST00000486441 GNRH1P01148 92 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 GPAT2Q6NUI2 795 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 CDC42EP5Q6NZY7 148 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 ATG9AQ7Z3C6 839 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 ANKRD23Q86SG2 305 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 ZFPM1Q8IX07 1006 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 FAM151AQ8WW52 585 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 ZNF341Q9BYN7 854 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 FAM198AQ9UFP1 575 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 SRRDQ9UH36 339 aa17.95■□□□□ 0.46
SDCCAG3-211ENST00000486441 FRAT2O75474 233 aaPredicted RBP17.94■□□□□ 0.46
SDCCAG3-211ENST00000486441 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
SDCCAG3-211ENST00000486441 OSBPP22059 807 aa17.94■□□□□ 0.46
SDCCAG3-211ENST00000486441 PRMT2P55345 433 aa17.94■□□□□ 0.46
SDCCAG3-211ENST00000486441 DIXDC1Q155Q3 683 aa17.94■□□□□ 0.46
SDCCAG3-211ENST00000486441 DAGLAQ9Y4D2 1042 aa17.94■□□□□ 0.46
SDCCAG3-211ENST00000486441 PDHXO00330 501 aa17.93■□□□□ 0.46
SDCCAG3-211ENST00000486441 PSMC4P43686 418 aa17.93■□□□□ 0.46
SDCCAG3-211ENST00000486441 PUM3Q15397 648 aaKnown RBP17.93■□□□□ 0.46
SDCCAG3-211ENST00000486441 DCAF15Q66K64 600 aa17.93■□□□□ 0.46
SDCCAG3-211ENST00000486441 ATRNL1Q5VV63 1379 aa17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 EYA2O00167 538 aa17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 BCRP11274 1271 aa17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 KIF22Q14807 665 aa17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 NOL9Q5SY16 702 aaKnown RBP17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 PRO3102Q9H379 93 aa17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 TMOD2Q9NZR1 351 aa17.92■□□□□ 0.46
SDCCAG3-211ENST00000486441 PHF20L1A8MW92 1017 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 PRDX5P30044 214 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 TCP10Q12799 353 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 WDR66Q8TBY9 1149 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 SSH1Q8WYL5 1049 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 HOOK2Q96ED9 719 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 MAST3O60307 1309 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 COL6A3P12111 3177 aa17.91■□□□□ 0.46
SDCCAG3-211ENST00000486441 WDHD1O75717 1129 aaPredicted RBP17.9■□□□□ 0.46
SDCCAG3-211ENST00000486441 IFIT1P09914 478 aaKnown RBP17.9■□□□□ 0.46
SDCCAG3-211ENST00000486441 SLURP2P0DP57 97 aa17.9■□□□□ 0.46
SDCCAG3-211ENST00000486441 SH3BP5LQ7L8J4 393 aa17.9■□□□□ 0.46
SDCCAG3-211ENST00000486441 LPIN2Q92539 896 aa17.9■□□□□ 0.46
SDCCAG3-211ENST00000486441 GJB1P08034 283 aa17.89■□□□□ 0.45
SDCCAG3-211ENST00000486441 CYP2C8P10632 490 aa17.89■□□□□ 0.45
SDCCAG3-211ENST00000486441 GRK4P32298 578 aa17.89■□□□□ 0.45
SDCCAG3-211ENST00000486441 GJA8P48165 433 aa17.89■□□□□ 0.45
SDCCAG3-211ENST00000486441 MAP3K10Q02779 954 aa17.89■□□□□ 0.45
SDCCAG3-211ENST00000486441 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
SDCCAG3-211ENST00000486441 CUL9Q8IWT3 2517 aa17.88■□□□□ 0.45
SDCCAG3-211ENST00000486441 CXCL11O14625 94 aa17.88■□□□□ 0.45
SDCCAG3-211ENST00000486441 CCL5P13501 91 aa17.88■□□□□ 0.45
SDCCAG3-211ENST00000486441 CHRDL2Q6WN34 429 aa17.88■□□□□ 0.45
SDCCAG3-211ENST00000486441 GABRQQ9UN88 632 aa17.88■□□□□ 0.45
SDCCAG3-211ENST00000486441 PTPRCP08575 1304 aa17.88■□□□□ 0.45
SDCCAG3-211ENST00000486441 ZBTB22O15209 634 aa17.87■□□□□ 0.45
SDCCAG3-211ENST00000486441 FMNL1O95466 1100 aaPredicted RBP17.87■□□□□ 0.45
SDCCAG3-211ENST00000486441 PRKCZQ05513 592 aa17.87■□□□□ 0.45
SDCCAG3-211ENST00000486441 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
SDCCAG3-211ENST00000486441 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
SDCCAG3-211ENST00000486441 SLC5A1P13866 664 aa17.86■□□□□ 0.45
SDCCAG3-211ENST00000486441 AFG3L2Q9Y4W6 797 aa17.86■□□□□ 0.45
SDCCAG3-211ENST00000486441 MYPNQ86TC9 1320 aa17.86■□□□□ 0.45
SDCCAG3-211ENST00000486441 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
SDCCAG3-211ENST00000486441 RFX7Q2KHR2 1363 aa17.86■□□□□ 0.45
SDCCAG3-211ENST00000486441 DOCK3Q8IZD9 2030 aa17.86■□□□□ 0.45
SDCCAG3-211ENST00000486441 A0A0G2JLL6 359 aaPredicted RBP17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 ANP32CO43423 234 aa17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 HOXD10P28358 340 aa17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 PHKA1P46020 1223 aa17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 PRRT2Q7Z6L0 340 aaPredicted RBP17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 RAET1EQ8TD07 263 aa17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 IDI2Q9BXS1 227 aa17.85■□□□□ 0.45
SDCCAG3-211ENST00000486441 GAKO14976 1311 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 PTPRAP18433 802 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 RGS3P49796 1198 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 DPF3Q92784 378 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 RNF208Q9H0X6 261 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 UNC93B1Q9H1C4 597 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 DDX4Q9NQI0 724 aaKnown RBP17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 ZHX2Q9Y6X8 837 aa17.84■□□□□ 0.45
SDCCAG3-211ENST00000486441 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
SDCCAG3-211ENST00000486441 DDTLA6NHG4 134 aaPredicted RBP17.83■□□□□ 0.44
SDCCAG3-211ENST00000486441 CIAO1O76071 339 aa17.83■□□□□ 0.44
SDCCAG3-211ENST00000486441 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.44
SDCCAG3-211ENST00000486441 ADORA1P30542 326 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms