RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 UQCRFS1P1P0C7P4 283 aa15.84■□□□□ 0.13
CHMP3-208ENST00000486404 SREBF2Q12772 1141 aa15.84■□□□□ 0.13
CHMP3-208ENST00000486404 MAP3K11Q16584 847 aa15.84■□□□□ 0.13
CHMP3-208ENST00000486404 APOBEC3HQ6NTF7 200 aaKnown RBP15.84■□□□□ 0.13
CHMP3-208ENST00000486404 SPATA5Q8NB90 893 aa15.84■□□□□ 0.13
CHMP3-208ENST00000486404 SLC10A4Q96EP9 437 aa15.84■□□□□ 0.13
CHMP3-208ENST00000486404 GPR108Q9NPR9 543 aa15.84■□□□□ 0.13
CHMP3-208ENST00000486404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-208ENST00000486404 MYO5AQ9Y4I1 1855 aaKnown RBP15.84■□□□□ 0.13
CHMP3-208ENST00000486404 HMMRO75330 724 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 ARID4AP29374 1257 aaPredicted RBP15.83■□□□□ 0.12
CHMP3-208ENST00000486404 CCDC158Q5M9N0 1113 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 LDLRAD1Q5T700 205 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 FKBP1CQ5VVH2 108 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 FAM83AQ86UY5 434 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 ERC1Q8IUD2 1116 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 ANKRD13AQ8IZ07 590 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 CSRNP1Q96S65 589 aa15.83■□□□□ 0.12
CHMP3-208ENST00000486404 UNCXA6NJT0 531 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 TRPA1O75762 1119 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 HSP90AB4PQ58FF6 505 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 SPRYD7Q5W111 196 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 PI16Q6UXB8 463 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 CDAN1Q8IWY9 1227 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 CLMNQ96JQ2 1002 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 TEPSINQ96N21 525 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 RNF186Q9NXI6 227 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 HMG20BQ9P0W2 317 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 NOP58Q9Y2X3 529 aaKnown RBP15.82■□□□□ 0.12
CHMP3-208ENST00000486404 CSADQ9Y600 493 aa15.82■□□□□ 0.12
CHMP3-208ENST00000486404 MROH7-TTC4A0A0A0MT08 1334 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 CAPN15O75808 1086 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
CHMP3-208ENST00000486404 GSTO1P78417 241 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 TCP10Q12799 353 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 DCAF15Q66K64 600 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 CDC42EP5Q6NZY7 148 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 WNK4Q96J92 1243 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
CHMP3-208ENST00000486404 DBNDD2Q9BQY9 259 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 USP40Q9NVE5 1235 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 RAI14Q9P0K7 980 aa15.81■□□□□ 0.12
CHMP3-208ENST00000486404 CDK5RAP2Q96SN8 1893 aa15.8■□□□□ 0.12
CHMP3-208ENST00000486404 GAKO14976 1311 aa15.8■□□□□ 0.12
CHMP3-208ENST00000486404 USP2O75604 605 aaPredicted RBP15.8■□□□□ 0.12
CHMP3-208ENST00000486404 MCAMP43121 646 aa15.8■□□□□ 0.12
CHMP3-208ENST00000486404 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
CHMP3-208ENST00000486404 LRP2BPQ9P2M1 347 aa15.8■□□□□ 0.12
CHMP3-208ENST00000486404 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
CHMP3-208ENST00000486404 MANSC4A6NHS7 340 aaPredicted RBP15.79■□□□□ 0.12
CHMP3-208ENST00000486404 BTDP43251 543 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 MECOMQ03112 1051 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 PDE3AQ14432 1141 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 AACSQ86V21 672 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 RPAP2Q8IXW5 612 aaPredicted RBP15.79■□□□□ 0.12
CHMP3-208ENST00000486404 FAM151AQ8WW52 585 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 WRNIP1Q96S55 665 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 NOL10Q9BSC4 688 aaKnown RBP15.79■□□□□ 0.12
CHMP3-208ENST00000486404 SNRKQ9NRH2 765 aa15.79■□□□□ 0.12
CHMP3-208ENST00000486404 DOCK1Q14185 1865 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 APBB1O00213 710 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 LDHCP07864 332 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 NFIAQ12857 509 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 VGLL4Q14135 290 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 TBC1D9Q6ZT07 1266 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHMP3-208ENST00000486404 OPTNQ96CV9 577 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 ZNF341Q9BYN7 854 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 CCDC8Q9H0W5 538 aaPredicted RBP15.78■□□□□ 0.12
CHMP3-208ENST00000486404 ZBTB40Q9NUA8 1239 aa15.78■□□□□ 0.12
CHMP3-208ENST00000486404 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
CHMP3-208ENST00000486404 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
CHMP3-208ENST00000486404 RFX7Q2KHR2 1363 aa15.77■□□□□ 0.12
CHMP3-208ENST00000486404 RGS3P49796 1198 aa15.77■□□□□ 0.12
CHMP3-208ENST00000486404 MAP3K9P80192 1104 aa15.77■□□□□ 0.12
CHMP3-208ENST00000486404 PICALMQ13492 652 aa15.77■□□□□ 0.12
CHMP3-208ENST00000486404 C20orf194Q5TEA3 1177 aa15.77■□□□□ 0.12
CHMP3-208ENST00000486404 ZSCAN29Q8IWY8 852 aaPredicted RBP15.77■□□□□ 0.12
CHMP3-208ENST00000486404 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
CHMP3-208ENST00000486404 ATAD5Q96QE3 1844 aa15.77■□□□□ 0.11
CHMP3-208ENST00000486404 ALDH1A1P00352 501 aa15.76■□□□□ 0.11
CHMP3-208ENST00000486404 TM4SF4P48230 202 aa15.76■□□□□ 0.11
CHMP3-208ENST00000486404 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.76■□□□□ 0.11
CHMP3-208ENST00000486404 NSUN4Q96CB9 384 aaKnown RBP15.76■□□□□ 0.11
CHMP3-208ENST00000486404 EAF2Q96CJ1 260 aaPredicted RBP15.76■□□□□ 0.11
CHMP3-208ENST00000486404 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
CHMP3-208ENST00000486404 IL1RAPL2Q9NP60 686 aa15.76■□□□□ 0.11
CHMP3-208ENST00000486404 MYH7P12883 1935 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 ENTPD3O75355 529 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 INHBEP58166 350 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 OTUD7BQ6GQQ9 843 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 NAA16Q6N069 864 aaPredicted RBP15.75■□□□□ 0.11
CHMP3-208ENST00000486404 MIGA2Q7L4E1 593 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 CLASRPQ8N2M8 674 aaKnown RBP15.75■□□□□ 0.11
CHMP3-208ENST00000486404 RHPN1Q8TCX5 695 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 KIF1BPQ96EK5 621 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 FAM163AQ96GL9 167 aaPredicted RBP15.75■□□□□ 0.11
CHMP3-208ENST00000486404 ZNF512BQ96KM6 892 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms