RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RAET1EQ8TD07 263 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 PLEKHF1Q96S99 279 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 RAPGEFL1Q9UHV5 662 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 MINPP1Q9UNW1 487 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 ADGRA2Q96PE1 1338 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 KLRK1P26718 216 aa10.8□□□□□ -0.68
XRN1-212ENST00000486211 MAGEA10P43363 369 aaPredicted RBP10.8□□□□□ -0.68
XRN1-212ENST00000486211 CCT4P50991 539 aaKnown RBP10.8□□□□□ -0.68
XRN1-212ENST00000486211 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
XRN1-212ENST00000486211 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
XRN1-212ENST00000486211 TEPSINQ96N21 525 aa10.8□□□□□ -0.68
XRN1-212ENST00000486211 CCDC85AQ96PX6 553 aaPredicted RBP10.8□□□□□ -0.68
XRN1-212ENST00000486211 CHPF2Q9P2E5 772 aa10.8□□□□□ -0.68
XRN1-212ENST00000486211 ZMYND8Q9ULU4 1186 aaPredicted RBP10.8□□□□□ -0.68
XRN1-212ENST00000486211 MYPNQ86TC9 1320 aa10.8□□□□□ -0.68
XRN1-212ENST00000486211 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 TTC28Q96AY4 2481 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 UBXN2AP68543 259 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 GTF2IP78347 998 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 CFAP100Q494V2 611 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
XRN1-212ENST00000486211 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
XRN1-212ENST00000486211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.79□□□□□ -0.68
XRN1-212ENST00000486211 CRISPLD2Q9H0B8 497 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 VEZTQ9HBM0 779 aa10.79□□□□□ -0.68
XRN1-212ENST00000486211 COL2A1P02458 1487 aaPredicted RBP10.79□□□□□ -0.68
XRN1-212ENST00000486211 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 PDE8AO60658 829 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 WDHD1O75717 1129 aaPredicted RBP10.78□□□□□ -0.68
XRN1-212ENST00000486211 CETPP11597 493 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 HOXD10P28358 340 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 PLA2G5P39877 138 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 PRKCZQ05513 592 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 KRT24Q2M2I5 525 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 C7orf61Q8IZ16 206 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 OXER1Q8TDS5 423 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 DIS3LQ8TF46 1054 aaKnown RBP10.78□□□□□ -0.68
XRN1-212ENST00000486211 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
XRN1-212ENST00000486211 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
XRN1-212ENST00000486211 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 BIN2Q9UBW5 565 aaPredicted RBP10.78□□□□□ -0.68
XRN1-212ENST00000486211 CPA4Q9UI42 421 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 MUC3AQ02505 3323 aa10.78□□□□□ -0.68
XRN1-212ENST00000486211 HRO43593 1189 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 MYO1BO43795 1136 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
XRN1-212ENST00000486211 PCCAP05165 728 aaPredicted RBP10.77□□□□□ -0.69
XRN1-212ENST00000486211 HSP90B1P14625 803 aaKnown RBP10.77□□□□□ -0.69
XRN1-212ENST00000486211 CAPN2P17655 700 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 PPP2R1AP30153 589 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
XRN1-212ENST00000486211 DEFB118Q96PH6 123 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
XRN1-212ENST00000486211 SNCAIPQ9Y6H5 919 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 IRS2Q9Y4H2 1338 aa10.77□□□□□ -0.69
XRN1-212ENST00000486211 ARAP2Q8WZ64 1704 aa10.76□□□□□ -0.69
XRN1-212ENST00000486211 TFRCP02786 760 aaKnown RBP10.76□□□□□ -0.69
XRN1-212ENST00000486211 SYN1P17600 705 aa10.76□□□□□ -0.69
XRN1-212ENST00000486211 PDE4AP27815 886 aa10.76□□□□□ -0.69
XRN1-212ENST00000486211 PLA2G2EQ9NZK7 142 aa10.76□□□□□ -0.69
XRN1-212ENST00000486211 GABRQQ9UN88 632 aa10.76□□□□□ -0.69
XRN1-212ENST00000486211 LEMD3Q9Y2U8 911 aa10.76□□□□□ -0.69
XRN1-212ENST00000486211 F8W031 263 aaPredicted RBP10.75□□□□□ -0.69
XRN1-212ENST00000486211 IRF6O14896 467 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 INHAP05111 366 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 SNAPC2Q13487 334 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 PPP1R15BQ5SWA1 713 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 NECAB2Q7Z6G3 386 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 ERO1BQ86YB8 467 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 CDC5LQ99459 802 aaKnown RBP10.75□□□□□ -0.69
XRN1-212ENST00000486211 UBE2OQ9C0C9 1292 aaKnown RBP10.75□□□□□ -0.69
XRN1-212ENST00000486211 CD209Q9NNX6 404 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 CSADQ9Y600 493 aa10.75□□□□□ -0.69
XRN1-212ENST00000486211 MGAMO43451 1857 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 ELNP15502 786 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 CTSWP56202 376 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 TNFAIP1Q13829 316 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 FAM161BQ96MY7 647 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 GREM2Q9H772 168 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 ZNF70Q9UC06 446 aaPredicted RBP10.74□□□□□ -0.69
XRN1-212ENST00000486211 FAM205AQ6ZU69 1335 aa10.74□□□□□ -0.69
XRN1-212ENST00000486211 ADCY3O60266 1144 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 NEFMP07197 916 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 BCRP11274 1271 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 FCGRTP55899 365 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 FKBP1AP62942 108 aaKnown RBP10.73□□□□□ -0.69
XRN1-212ENST00000486211 PPIL2Q13356 520 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 HDGFL1Q5TGJ6 251 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 CCDC191Q8NCU4 936 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 TTLL11Q8NHH1 800 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
XRN1-212ENST00000486211 PXYLP1Q8TE99 480 aa10.73□□□□□ -0.69
XRN1-212ENST00000486211 DBF4Q9UBU7 674 aaPredicted RBP10.73□□□□□ -0.69
XRN1-212ENST00000486211 PDHXO00330 501 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms