RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TRIM17Q9Y577 477 aa11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 LRRFIP2Q9Y608 721 aaKnown RBP11.65□□□□□ -0.54
TMEM39A-208ENST00000486159 ZSWIM8A7E2V4 1837 aa11.65□□□□□ -0.55
TMEM39A-208ENST00000486159 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 ADORA1P30542 326 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 PUM3Q15397 648 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 FBXO46Q6PJ61 603 aaPredicted RBP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 MIGA2Q7L4E1 593 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 ARHGAP45Q92619 1136 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 ZKSCAN4Q969J2 545 aaPredicted RBP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 MEIS3Q99687 375 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 HTTP42858 3142 aa11.64□□□□□ -0.55
TMEM39A-208ENST00000486159 CENPFP49454 3210 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 MYH13Q9UKX3 1938 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 PRDX5P30044 214 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 PHKA1P46020 1223 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 TCP10Q12799 353 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 ZFPM1Q8IX07 1006 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 TEKT1Q969V4 418 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 ZDHHC15Q96MV8 337 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 SNCAIPQ9Y6H5 919 aa11.63□□□□□ -0.55
TMEM39A-208ENST00000486159 CCL15-CCL14A0A0B4J2E2 113 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 INHBEP58166 350 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 NFIAQ12857 509 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 TNFAIP1Q13829 316 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 PKN2Q16513 984 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 CCL15Q16663 113 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 LPIN2Q92539 896 aa11.62□□□□□ -0.55
TMEM39A-208ENST00000486159 ALDH1A1P00352 501 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 UBTFL1P0CB47 393 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 SLC5A1P13866 664 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 INPP5BP32019 993 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 TIMM10P62072 90 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 CDC42EP5Q6NZY7 148 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 FRAT1Q92837 279 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 ARHGAP39Q9C0H5 1083 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
TMEM39A-208ENST00000486159 UNCXA6NJT0 531 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 TNNI2P48788 182 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 SP3Q02447 781 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 HHIPL2Q6UWX4 724 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 FTSJ3Q8IY81 847 aaKnown RBP11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 DDX19BQ9UMR2 479 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 MKI67P46013 3256 aaKnown RBP11.6□□□□□ -0.55
TMEM39A-208ENST00000486159 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 IRF6O14896 467 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 MVPQ14764 893 aaKnown RBP11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 HABP4Q5JVS0 413 aaKnown RBP11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 GCC1Q96CN9 775 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 USP40Q9NVE5 1235 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 CEP126Q9P2H0 1117 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 CSADQ9Y600 493 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 BRCA2P51587 3418 aa11.59□□□□□ -0.55
TMEM39A-208ENST00000486159 AK9Q5TCS8 1911 aa11.58□□□□□ -0.55
TMEM39A-208ENST00000486159 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 CTGFP29279 349 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 TFCP2Q12800 502 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 TAF1CQ15572 869 aaPredicted RBP11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 CCDC102BQ68D86 513 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 FAM83AQ86UY5 434 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 WDR66Q8TBY9 1149 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 PANK1Q8TE04 598 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
TMEM39A-208ENST00000486159 MYH2Q9UKX2 1941 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 CIAO1O76071 339 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 TRIM27P14373 513 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 EN2P19622 333 aaPredicted RBP11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 IL15P40933 162 aaPredicted RBP11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 GTF2A2P52657 109 aa11.57□□□□□ -0.56
TMEM39A-208ENST00000486159 MOGSQ13724 837 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms