RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 SUPT20HL1Q3ZLR7 823 aa20.49■□□□□ 0.87
CCHCR1-214ENST00000486060 GORABQ5T7V8 394 aa20.49■□□□□ 0.87
CCHCR1-214ENST00000486060 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
CCHCR1-214ENST00000486060 CCDC8Q9H0W5 538 aaPredicted RBP20.49■□□□□ 0.87
CCHCR1-214ENST00000486060 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
CCHCR1-214ENST00000486060 NFIAQ12857 509 aa20.48■□□□□ 0.87
CCHCR1-214ENST00000486060 FKBP1CQ5VVH2 108 aa20.48■□□□□ 0.87
CCHCR1-214ENST00000486060 FAM83AQ86UY5 434 aa20.48■□□□□ 0.87
CCHCR1-214ENST00000486060 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
CCHCR1-214ENST00000486060 SNRKQ9NRH2 765 aa20.48■□□□□ 0.87
CCHCR1-214ENST00000486060 RFX7Q2KHR2 1363 aa20.47■□□□□ 0.87
CCHCR1-214ENST00000486060 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
CCHCR1-214ENST00000486060 UQCRFS1P1P0C7P4 283 aa20.47■□□□□ 0.87
CCHCR1-214ENST00000486060 MECOMQ03112 1051 aa20.47■□□□□ 0.87
CCHCR1-214ENST00000486060 MKRN3Q13064 507 aaKnown RBP20.47■□□□□ 0.87
CCHCR1-214ENST00000486060 FAM198AQ9UFP1 575 aa20.47■□□□□ 0.87
CCHCR1-214ENST00000486060 TNNI2P48788 182 aa20.46■□□□□ 0.87
CCHCR1-214ENST00000486060 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.46■□□□□ 0.87
CCHCR1-214ENST00000486060 FAM163AQ96GL9 167 aaPredicted RBP20.46■□□□□ 0.87
CCHCR1-214ENST00000486060 BEGAINQ9BUH8 593 aa20.46■□□□□ 0.87
CCHCR1-214ENST00000486060 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
CCHCR1-214ENST00000486060 RPAP1Q9BWH6 1393 aaPredicted RBP20.46■□□□□ 0.87
CCHCR1-214ENST00000486060 GJA5P36382 358 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 TTC39AQ5SRH9 613 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 SPRYD7Q5W111 196 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 DZIP1Q86YF9 867 aaKnown RBP20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 ZFPM1Q8IX07 1006 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 RHPN1Q8TCX5 695 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 NSUN4Q96CB9 384 aaKnown RBP20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 ZNF512BQ96KM6 892 aaPredicted RBP20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 USP40Q9NVE5 1235 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 RNF186Q9NXI6 227 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
CCHCR1-214ENST00000486060 CYP2E1P05181 493 aaPredicted RBP20.44■□□□□ 0.86
CCHCR1-214ENST00000486060 TCP10Q12799 353 aa20.44■□□□□ 0.86
CCHCR1-214ENST00000486060 SPTY2D1Q68D10 685 aaPredicted RBP20.44■□□□□ 0.86
CCHCR1-214ENST00000486060 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.44■□□□□ 0.86
CCHCR1-214ENST00000486060 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.44■□□□□ 0.86
CCHCR1-214ENST00000486060 SIPA1L1O43166 1804 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 CA12O43570 354 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 ZAP70P43403 619 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 IREB2P48200 963 aaKnown RBP20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 RHBDL3P58872 404 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 CCDC158Q5M9N0 1113 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 ERC1Q8IUD2 1116 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 FAM151AQ8WW52 585 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
CCHCR1-214ENST00000486060 GPR75-ASB3A0A0A6YYF3 556 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 APBB1O00213 710 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 WDHD1O75717 1129 aaPredicted RBP20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 TRPA1O75762 1119 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 BTDP43251 543 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 AACSQ86V21 672 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 ANKRD13AQ8IZ07 590 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 SLC10A4Q96EP9 437 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 DDX4Q9NQI0 724 aaKnown RBP20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 PIH1D3Q9NQM4 214 aaKnown RBP20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 NDUFB9Q9Y6M9 179 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 MYH7P12883 1935 aa20.42■□□□□ 0.86
CCHCR1-214ENST00000486060 UNCXA6NJT0 531 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 HMMRO75330 724 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 TM4SF4P48230 202 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 RRP1P56182 461 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 IFFO2Q5TF58 517 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 SH3BP5LQ7L8J4 393 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 TNS4Q8IZW8 715 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 IDI2Q9BXS1 227 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 ATRNL1Q5VV63 1379 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 PHIPQ8WWQ0 1821 aa20.41■□□□□ 0.86
CCHCR1-214ENST00000486060 RGS3P49796 1198 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 VGLL4Q14135 290 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 MIGA2Q7L4E1 593 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 ATAD5Q96QE3 1844 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 SAGE1Q9NXZ1 904 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 RAI14Q9P0K7 980 aa20.4■□□□□ 0.86
CCHCR1-214ENST00000486060 PTPRFP10586 1907 aa20.39■□□□□ 0.86
CCHCR1-214ENST00000486060 MYH1P12882 1939 aa20.39■□□□□ 0.86
CCHCR1-214ENST00000486060 SLURP2P0DP57 97 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 MAP3K9P80192 1104 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 ADGRA1Q86SQ6 560 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 SLF2Q8IX21 1173 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 REM2Q8IYK8 340 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 ANTXR1Q9H6X2 564 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 LRP2BPQ9P2M1 347 aa20.39■□□□□ 0.85
CCHCR1-214ENST00000486060 ZBTB48P10074 688 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-214ENST00000486060 SNCAIPQ9Y6H5 919 aa20.38■□□□□ 0.85
CCHCR1-214ENST00000486060 DOCK1Q14185 1865 aa20.38■□□□□ 0.85
CCHCR1-214ENST00000486060 DDTLA6NHG4 134 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-214ENST00000486060 ENTPD3O75355 529 aa20.37■□□□□ 0.85
CCHCR1-214ENST00000486060 ZKSCAN4Q969J2 545 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-214ENST00000486060 OPTNQ96CV9 577 aa20.37■□□□□ 0.85
CCHCR1-214ENST00000486060 RAB11FIP3O75154 756 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms