RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
SND1-213ENST00000486037 DZIP1LQ8IYY4 767 aaKnown RBP12.57□□□□□ -0.4
SND1-213ENST00000486037 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
SND1-213ENST00000486037 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
SND1-213ENST00000486037 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
SND1-213ENST00000486037 INPP5BP32019 993 aa12.56□□□□□ -0.4
SND1-213ENST00000486037 FCGRTP55899 365 aa12.56□□□□□ -0.4
SND1-213ENST00000486037 NECAB2Q7Z6G3 386 aa12.56□□□□□ -0.4
SND1-213ENST00000486037 UBE2OQ9C0C9 1292 aaKnown RBP12.56□□□□□ -0.4
SND1-213ENST00000486037 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
SND1-213ENST00000486037 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
SND1-213ENST00000486037 TTF2Q9UNY4 1162 aaKnown RBP12.56□□□□□ -0.4
SND1-213ENST00000486037 CRKP46108 304 aa12.55□□□□□ -0.4
SND1-213ENST00000486037 GPAT2Q6NUI2 795 aa12.55□□□□□ -0.4
SND1-213ENST00000486037 UBE3BQ7Z3V4 1068 aa12.55□□□□□ -0.4
SND1-213ENST00000486037 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
SND1-213ENST00000486037 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
SND1-213ENST00000486037 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
SND1-213ENST00000486037 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
SND1-213ENST00000486037 COL2A1P02458 1487 aaPredicted RBP12.54□□□□□ -0.4
SND1-213ENST00000486037 H7C1W4 665 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 CASP7P55210 303 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.45e-6■□□□□ 10.1
SND1-213ENST00000486037 PPATQ06203 517 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 MFSD14BQ5SR56 506 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 ZNF804AQ7Z570 1209 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
SND1-213ENST00000486037 PI4KAP2A4QPH2 592 aa12.53□□□□□ -0.4
SND1-213ENST00000486037 NEURL1BA8MQ27 555 aa12.53□□□□□ -0.4
SND1-213ENST00000486037 CSF1RP07333 972 aa12.53□□□□□ -0.4
SND1-213ENST00000486037 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.48e-6■■□□□ 11.7
SND1-213ENST00000486037 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
SND1-213ENST00000486037 PI4KAP1Q8N8J0 262 aa12.53□□□□□ -0.4
SND1-213ENST00000486037 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
SND1-213ENST00000486037 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■■□□ 15.7
SND1-213ENST00000486037 TNNI2P48788 182 aa12.52□□□□□ -0.41
SND1-213ENST00000486037 TRIM32Q13049 653 aa12.52□□□□□ -0.41
SND1-213ENST00000486037 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.41
SND1-213ENST00000486037 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
SND1-213ENST00000486037 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
SND1-213ENST00000486037 PFASO15067 1338 aa12.52□□□□□ -0.41
SND1-213ENST00000486037 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
SND1-213ENST00000486037 IRF5Q13568 498 aa12.51□□□□□ -0.41
SND1-213ENST00000486037 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
SND1-213ENST00000486037 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
SND1-213ENST00000486037 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
SND1-213ENST00000486037 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
SND1-213ENST00000486037 CDX2Q99626 313 aaPredicted RBP12.51□□□□□ -0.41
SND1-213ENST00000486037 PLIN1O60240 522 aa12.5□□□□□ -0.41
SND1-213ENST00000486037 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
SND1-213ENST00000486037 GYG1P46976 350 aa12.5□□□□□ -0.41
SND1-213ENST00000486037 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
SND1-213ENST00000486037 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
SND1-213ENST00000486037 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
SND1-213ENST00000486037 TNPO2O14787 897 aaKnown RBP12.49□□□□□ -0.41
SND1-213ENST00000486037 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
SND1-213ENST00000486037 CENPBP07199 599 aaPredicted RBP12.49□□□□□ -0.41
SND1-213ENST00000486037 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
SND1-213ENST00000486037 ZNF594Q96JF6 807 aaPredicted RBP12.49□□□□□ -0.41
SND1-213ENST00000486037 ZNF341Q9BYN7 854 aa12.49□□□□□ -0.41
SND1-213ENST00000486037 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 GCKRQ14397 625 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 G2E3Q7L622 706 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 MYLIPQ8WY64 445 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
SND1-213ENST00000486037 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
SND1-213ENST00000486037 IQSEC3Q9UPP2 1182 aaPredicted RBP12.48□□□□□ -0.41
SND1-213ENST00000486037 CAPN2P17655 700 aa12.47□□□□□ -0.41
SND1-213ENST00000486037 PLA2G5P39877 138 aa12.47□□□□□ -0.41
SND1-213ENST00000486037 LRRC26Q2I0M4 334 aa12.47□□□□□ -0.41
SND1-213ENST00000486037 APOBEC3HQ6NTF7 200 aaKnown RBP12.47□□□□□ -0.41
SND1-213ENST00000486037 FAM83AQ86UY5 434 aa12.47□□□□□ -0.41
SND1-213ENST00000486037 FAM84BQ96KN1 310 aaPredicted RBP12.47□□□□□ -0.41
SND1-213ENST00000486037 RPAP1Q9BWH6 1393 aaPredicted RBP12.46□□□□□ -0.41
SND1-213ENST00000486037 FOXO4P98177 505 aa12.46□□□□□ -0.41
SND1-213ENST00000486037 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.41
SND1-213ENST00000486037 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.41
SND1-213ENST00000486037 DCAF15Q66K64 600 aa12.46□□□□□ -0.41
SND1-213ENST00000486037 OGDHLQ9ULD0 1010 aa12.46□□□□□ -0.41
SND1-213ENST00000486037 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 COL6A1P12109 1028 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 HIBADHP31937 336 aaKnown RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 NEXNQ0ZGT2 675 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 ZDHHC15Q96MV8 337 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 SEMA6BQ9H3T3 888 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.45□□□□□ -0.42
SND1-213ENST00000486037 PTPRFP10586 1907 aa12.45□□□□□ -0.42
SND1-213ENST00000486037 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
SND1-213ENST00000486037 CXCL11O14625 94 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms