RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SALL1Q9NSC2 1324 aa21.72■■□□□ 1.07
COL6A1-204ENST00000486023 TBC1D8O95759 1140 aa21.71■■□□□ 1.07
COL6A1-204ENST00000486023 CCDC158Q5M9N0 1113 aa21.71■■□□□ 1.07
COL6A1-204ENST00000486023 MIGA2Q7L4E1 593 aa21.71■■□□□ 1.07
COL6A1-204ENST00000486023 CCDC8Q9H0W5 538 aaPredicted RBP21.71■■□□□ 1.07
COL6A1-204ENST00000486023 RAI14Q9P0K7 980 aa21.71■■□□□ 1.07
COL6A1-204ENST00000486023 SREBF2Q12772 1141 aa21.7■■□□□ 1.06
COL6A1-204ENST00000486023 NFIAQ12857 509 aa21.7■■□□□ 1.06
COL6A1-204ENST00000486023 FAM83AQ86UY5 434 aa21.7■■□□□ 1.06
COL6A1-204ENST00000486023 WNK4Q96J92 1243 aa21.7■■□□□ 1.06
COL6A1-204ENST00000486023 SAGE1Q9NXZ1 904 aa21.7■■□□□ 1.06
COL6A1-204ENST00000486023 DDX19BQ9UMR2 479 aa21.7■■□□□ 1.06
COL6A1-204ENST00000486023 ARAP2Q8WZ64 1704 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 UQCRFS1P1P0C7P4 283 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 MCAMP43121 646 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 MAP3K9P80192 1104 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 MECOMQ03112 1051 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 C20orf194Q5TEA3 1177 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 SLF2Q8IX21 1173 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 LRP2BPQ9P2M1 347 aa21.69■■□□□ 1.06
COL6A1-204ENST00000486023 NOP58Q9Y2X3 529 aaKnown RBP21.69■■□□□ 1.06
COL6A1-204ENST00000486023 TM4SF4P48230 202 aa21.68■■□□□ 1.06
COL6A1-204ENST00000486023 FKBP1CQ5VVH2 108 aa21.68■■□□□ 1.06
COL6A1-204ENST00000486023 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.68■■□□□ 1.06
COL6A1-204ENST00000486023 FAM151AQ8WW52 585 aa21.68■■□□□ 1.06
COL6A1-204ENST00000486023 GPR108Q9NPR9 543 aa21.68■■□□□ 1.06
COL6A1-204ENST00000486023 CSADQ9Y600 493 aa21.68■■□□□ 1.06
COL6A1-204ENST00000486023 ECM29Q5VYK3 1845 aa21.67■■□□□ 1.06
COL6A1-204ENST00000486023 ARID4AP29374 1257 aaPredicted RBP21.67■■□□□ 1.06
COL6A1-204ENST00000486023 BTDP43251 543 aa21.67■■□□□ 1.06
COL6A1-204ENST00000486023 ZFPM1Q8IX07 1006 aa21.67■■□□□ 1.06
COL6A1-204ENST00000486023 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
COL6A1-204ENST00000486023 OPTNQ96CV9 577 aa21.67■■□□□ 1.06
COL6A1-204ENST00000486023 WRNIP1Q96S55 665 aa21.67■■□□□ 1.06
COL6A1-204ENST00000486023 TLR7Q9NYK1 1049 aaKnown RBP21.67■■□□□ 1.06
COL6A1-204ENST00000486023 PDS5AQ29RF7 1337 aaKnown RBP21.66■■□□□ 1.06
COL6A1-204ENST00000486023 MANSC4A6NHS7 340 aaPredicted RBP21.66■■□□□ 1.06
COL6A1-204ENST00000486023 GJA5P36382 358 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 PICALMQ13492 652 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 DGKZQ13574 1117 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 VGLL4Q14135 290 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.66■■□□□ 1.06
COL6A1-204ENST00000486023 ZSCAN29Q8IWY8 852 aaPredicted RBP21.66■■□□□ 1.06
COL6A1-204ENST00000486023 ZKSCAN4Q969J2 545 aaPredicted RBP21.66■■□□□ 1.06
COL6A1-204ENST00000486023 EAF2Q96CJ1 260 aaPredicted RBP21.66■■□□□ 1.06
COL6A1-204ENST00000486023 HOOK2Q96ED9 719 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 FAM198AQ9UFP1 575 aa21.66■■□□□ 1.06
COL6A1-204ENST00000486023 UNCXA6NJT0 531 aa21.65■■□□□ 1.06
COL6A1-204ENST00000486023 ZBTB48P10074 688 aaPredicted RBP21.65■■□□□ 1.06
COL6A1-204ENST00000486023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.65■■□□□ 1.06
COL6A1-204ENST00000486023 ZBTB40Q9NUA8 1239 aa21.65■■□□□ 1.06
COL6A1-204ENST00000486023 DBNLQ9UJU6 430 aaKnown RBP21.65■■□□□ 1.06
COL6A1-204ENST00000486023 MYH13Q9UKX3 1938 aa21.65■■□□□ 1.06
COL6A1-204ENST00000486023 MROH7-TTC4A0A0A0MT08 1334 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 RGS3P49796 1198 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 GSTO1P78417 241 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 DCAF15Q66K64 600 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 AACSQ86V21 672 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 ERC1Q8IUD2 1116 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 RPAP2Q8IXW5 612 aaPredicted RBP21.64■■□□□ 1.05
COL6A1-204ENST00000486023 OTUD5Q96G74 571 aa21.64■■□□□ 1.05
COL6A1-204ENST00000486023 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
COL6A1-204ENST00000486023 GAKO14976 1311 aa21.63■■□□□ 1.05
COL6A1-204ENST00000486023 HMMRO75330 724 aa21.63■■□□□ 1.05
COL6A1-204ENST00000486023 LDHCP07864 332 aa21.63■■□□□ 1.05
COL6A1-204ENST00000486023 NSUN4Q96CB9 384 aaKnown RBP21.63■■□□□ 1.05
COL6A1-204ENST00000486023 ABHD8Q96I13 439 aa21.63■■□□□ 1.05
COL6A1-204ENST00000486023 ZNF341Q9BYN7 854 aa21.63■■□□□ 1.05
COL6A1-204ENST00000486023 MCOLN1Q9GZU1 580 aa21.63■■□□□ 1.05
COL6A1-204ENST00000486023 ZBTB22O15209 634 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 ZAP70P43403 619 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 INHBEP58166 350 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 HSP90AB4PQ58FF6 505 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 IFNL1Q8IU54 200 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 SIRT2Q8IXJ6 389 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 ZNF384Q8TF68 577 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 FAM163AQ96GL9 167 aaPredicted RBP21.62■■□□□ 1.05
COL6A1-204ENST00000486023 R3HDMLQ9H3Y0 253 aa21.62■■□□□ 1.05
COL6A1-204ENST00000486023 CYP2E1P05181 493 aaPredicted RBP21.61■■□□□ 1.05
COL6A1-204ENST00000486023 PDE3AQ14432 1141 aa21.61■■□□□ 1.05
COL6A1-204ENST00000486023 RHPN1Q8TCX5 695 aa21.61■■□□□ 1.05
COL6A1-204ENST00000486023 NOL10Q9BSC4 688 aaKnown RBP21.61■■□□□ 1.05
COL6A1-204ENST00000486023 NDUFB9Q9Y6M9 179 aa21.61■■□□□ 1.05
COL6A1-204ENST00000486023 CASP8AP2Q9UKL3 1982 aa21.6■■□□□ 1.05
COL6A1-204ENST00000486023 GPR75-ASB3A0A0A6YYF3 556 aa21.6■■□□□ 1.05
COL6A1-204ENST00000486023 CCDC85CA6NKD9 419 aa21.6■■□□□ 1.05
COL6A1-204ENST00000486023 IGF2BP3O00425 579 aaKnown RBP eCLIP21.6■■□□□ 1.05
COL6A1-204ENST00000486023 INPP5BP32019 993 aa21.6■■□□□ 1.05
COL6A1-204ENST00000486023 NAA16Q6N069 864 aaPredicted RBP21.6■■□□□ 1.05
COL6A1-204ENST00000486023 ZNF296Q8WUU4 475 aaPredicted RBP21.6■■□□□ 1.05
COL6A1-204ENST00000486023 WDHD1O75717 1129 aaPredicted RBP21.59■■□□□ 1.05
COL6A1-204ENST00000486023 ALDH1A1P00352 501 aa21.59■■□□□ 1.05
COL6A1-204ENST00000486023 OTUD7BQ6GQQ9 843 aa21.59■■□□□ 1.05
COL6A1-204ENST00000486023 IDI2Q9BXS1 227 aa21.59■■□□□ 1.05
COL6A1-204ENST00000486023 DDX4Q9NQI0 724 aaKnown RBP21.59■■□□□ 1.05
COL6A1-204ENST00000486023 SNCAIPQ9Y6H5 919 aa21.59■■□□□ 1.05
COL6A1-204ENST00000486023 CCL15-CCL14A0A0B4J2E2 113 aa21.58■■□□□ 1.05
COL6A1-204ENST00000486023 GPR25O00155 361 aa21.58■■□□□ 1.05
COL6A1-204ENST00000486023 ENTPD3O75355 529 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms