RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
SND1-212ENST00000485871 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
SND1-212ENST00000485871 DZIP1Q86YF9 867 aaKnown RBP13.57□□□□□ -0.24
SND1-212ENST00000485871 LCORLQ8N3X6 602 aa13.57□□□□□ -0.24
SND1-212ENST00000485871 MROH7-TTC4A0A0A0MT08 1334 aa13.57□□□□□ -0.24
SND1-212ENST00000485871 FZD9O00144 591 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 PSMD14O00487 310 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 PPP4CP60510 307 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 CXCL9Q07325 125 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 BECN1Q14457 450 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 KIAA1211Q6ZU35 1233 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 RBM8AQ9Y5S9 174 aaKnown RBP13.56□□□□□ -0.24
SND1-212ENST00000485871 MYH1P12882 1939 aa13.56□□□□□ -0.24
SND1-212ENST00000485871 GPR75-ASB3A0A0A6YYF3 556 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 MAGEB6P1A0A0J9YX57 407 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 RAD17O75943 681 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 LDHCP07864 332 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
SND1-212ENST00000485871 GSTO1P78417 241 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 RSBN1LQ6PCB5 846 aaPredicted RBP13.55□□□□□ -0.24
SND1-212ENST00000485871 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 EPB41L4AQ9HCS5 686 aaPredicted RBP13.55□□□□□ -0.24
SND1-212ENST00000485871 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
SND1-212ENST00000485871 ZMYM6O95789 1325 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 MYO3BQ8WXR4 1341 aa13.55□□□□□ -0.24
SND1-212ENST00000485871 PCNTO95613 3336 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 GSG1L2A8MUP6 293 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 SLC34A2O95436 690 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 LMNB1P20700 586 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
SND1-212ENST00000485871 ALX1Q15699 326 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 JDP2Q8WYK2 163 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 AATFQ9NY61 560 aaKnown RBP eCLIP13.54□□□□□ -0.24
SND1-212ENST00000485871 DAGLAQ9Y4D2 1042 aa13.54□□□□□ -0.24
SND1-212ENST00000485871 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
SND1-212ENST00000485871 RPAP1Q9BWH6 1393 aaPredicted RBP13.54□□□□□ -0.24
SND1-212ENST00000485871 PATL2C9JE40 543 aaKnown RBP13.53□□□□□ -0.24
SND1-212ENST00000485871 PRKAB2O43741 272 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 GNAT2P19087 354 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 BTDP43251 543 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 RHBDL3P58872 404 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 ANAPC15P60006 121 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 CREB3L3Q68CJ9 461 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
SND1-212ENST00000485871 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
SND1-212ENST00000485871 SLC27A2O14975 620 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 FGAP02671 866 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 CYP21A2P08686 494 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 CRKP46108 304 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 SCNN1DP51172 638 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
SND1-212ENST00000485871 SLF2Q8IX21 1173 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 AGBL3Q8NEM8 1001 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 ZDHHC15Q96MV8 337 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 MKRN1Q9UHC7 482 aaKnown RBP13.52□□□□□ -0.25
SND1-212ENST00000485871 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
SND1-212ENST00000485871 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 SIPA1L1O43166 1804 aa13.52□□□□□ -0.25
SND1-212ENST00000485871 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
SND1-212ENST00000485871 CERS3Q8IU89 383 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
SND1-212ENST00000485871 SDR42E1Q8WUS8 393 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 SERPINA10Q9UK55 444 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
SND1-212ENST00000485871 MCCP23508 829 aa13.5□□□□□ -0.25
SND1-212ENST00000485871 TNIP1Q15025 636 aa13.5□□□□□ -0.25
SND1-212ENST00000485871 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
SND1-212ENST00000485871 ZBED3Q96IU2 234 aaPredicted RBP13.5□□□□□ -0.25
SND1-212ENST00000485871 BAG3O95817 575 aa13.49□□□□□ -0.25
SND1-212ENST00000485871 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
SND1-212ENST00000485871 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
SND1-212ENST00000485871 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
SND1-212ENST00000485871 STOX1Q6ZVD7 989 aa13.49□□□□□ -0.25
SND1-212ENST00000485871 MTMR14Q8NCE2 650 aa13.49□□□□□ -0.25
SND1-212ENST00000485871 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
SND1-212ENST00000485871 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
SND1-212ENST00000485871 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
SND1-212ENST00000485871 SHTN1A0MZ66 631 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 WDHD1O75717 1129 aaPredicted RBP13.48□□□□□ -0.25
SND1-212ENST00000485871 PLCG2P16885 1265 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
SND1-212ENST00000485871 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
SND1-212ENST00000485871 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 DPF2Q92785 391 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms