RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 HOOK2Q96ED9 719 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-208ENST00000485618 DNAJC2Q99543 621 aaKnown RBP10.02□□□□□ -0.81
SF3A1-208ENST00000485618 MXD3Q9BW11 206 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 BOLA2Q9H3K6 86 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 PAG1Q9NWQ8 432 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 TLR7Q9NYK1 1049 aaKnown RBP10.02□□□□□ -0.81
SF3A1-208ENST00000485618 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-208ENST00000485618 AOX1Q06278 1338 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 PITPNM2Q9BZ72 1349 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 TNRC18O15417 2968 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-208ENST00000485618 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 GOLIM4O00461 696 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 IDH1O75874 414 aaKnown RBP10.01□□□□□ -0.81
SF3A1-208ENST00000485618 CYP2E1P05181 493 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-208ENST00000485618 ZFYP08048 801 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-208ENST00000485618 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 NF2P35240 595 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 HUNKP57058 714 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 NOGQ13253 232 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 MCOLN1Q9GZU1 580 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 STAP2Q9UGK3 403 aa10.01□□□□□ -0.81
SF3A1-208ENST00000485618 ARAP2Q8WZ64 1704 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 ADM5C9JUS6 153 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 WNT10BO00744 389 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 PDE1AP54750 535 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 MECOMQ03112 1051 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 DGKZQ13574 1117 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 SLC9C2Q5TAH2 1124 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 FKBP1CQ5VVH2 108 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 KRT26Q7Z3Y9 468 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 PPP2R3BQ9Y5P8 575 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 SCN9AQ15858 1988 aa10□□□□□ -0.81
SF3A1-208ENST00000485618 PSME4Q14997 1843 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 CYP7A1P22680 504 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 PRDX5P30044 214 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 SUPT20HL1Q3ZLR7 823 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 ANGEL2Q5VTE6 544 aaKnown RBP9.99□□□□□ -0.81
SF3A1-208ENST00000485618 DLK2Q6UY11 383 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 NSUN4Q96CB9 384 aaKnown RBP9.99□□□□□ -0.81
SF3A1-208ENST00000485618 EVI5LQ96CN4 794 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 PRMT6Q96LA8 375 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-208ENST00000485618 ZIC5Q96T25 663 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 OSBPL3Q9H4L5 887 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 VEZTQ9HBM0 779 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-208ENST00000485618 USP40Q9NVE5 1235 aa9.99□□□□□ -0.81
SF3A1-208ENST00000485618 MYH13Q9UKX3 1938 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 GPR75-ASB3A0A0A6YYF3 556 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 TRIM6-TRIM34B2RNG4 842 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 HIP1O00291 1037 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 EGFRP00533 1210 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 NBPF9Q3BBW0 867 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 SPDYE2Q495Y8 402 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 RGMBQ6NW40 437 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 PI16Q6UXB8 463 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 MAGEB6Q8N7X4 407 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 C2orf69Q8N8R5 385 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 KBTBD3Q8NAB2 608 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 FSD1Q9BTV5 496 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 PIH1D3Q9NQM4 214 aaKnown RBP9.98□□□□□ -0.81
SF3A1-208ENST00000485618 GGA3Q9NZ52 723 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 ZNF70Q9UC06 446 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-208ENST00000485618 MROH7-TTC4A0A0A0MT08 1334 aa9.98□□□□□ -0.81
SF3A1-208ENST00000485618 FAM155AB1AL88 458 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-208ENST00000485618 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-208ENST00000485618 BTDP43251 543 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 RGS19P49795 217 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 PPP4CP60510 307 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 UBE3CQ15386 1083 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 APOBEC3HQ6NTF7 200 aaKnown RBP9.97□□□□□ -0.81
SF3A1-208ENST00000485618 FAM83AQ86UY5 434 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 ZBED3Q96IU2 234 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-208ENST00000485618 DEFB129Q9H1M3 183 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 TDRD3Q9H7E2 651 aaKnown RBP9.97□□□□□ -0.81
SF3A1-208ENST00000485618 DAGLAQ9Y4D2 1042 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 GAKO14976 1311 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 CASP8AP2Q9UKL3 1982 aa9.97□□□□□ -0.81
SF3A1-208ENST00000485618 MAGEB6P1A0A0J9YX57 407 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 CLRN2A0PK11 232 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.82
SF3A1-208ENST00000485618 NPM3O75607 178 aaKnown RBP9.96□□□□□ -0.82
SF3A1-208ENST00000485618 PDE6AP16499 860 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 ZNF157P51786 506 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-208ENST00000485618 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.82
SF3A1-208ENST00000485618 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 CDC42EP5Q6NZY7 148 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 PLEKHM2Q8IWE5 1019 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 TEX11Q8IYF3 940 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 RILPL2Q969X0 211 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 CRNKL1Q9BZJ0 848 aaKnown RBP9.96□□□□□ -0.82
SF3A1-208ENST00000485618 SAGE1Q9NXZ1 904 aa9.96□□□□□ -0.82
SF3A1-208ENST00000485618 ASTN2O75129 1339 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms