RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 EFCC1Q9HA90 598 aa16.52■□□□□ 0.24
UBA3-210ENST00000485424 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.24
UBA3-210ENST00000485424 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 CCL15-CCL14A0A0B4J2E2 113 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 EYA2O00167 538 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 BCAMP50895 628 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
UBA3-210ENST00000485424 CCL15Q16663 113 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 ARMC5Q96C12 935 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 OTUD5Q96G74 571 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 SIL1Q9H173 461 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 CSADQ9Y600 493 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 FOCADQ5VW36 1801 aa16.51■□□□□ 0.23
UBA3-210ENST00000485424 GTF2A2P52657 109 aa16.5■□□□□ 0.23
UBA3-210ENST00000485424 LPIN2Q92539 896 aa16.5■□□□□ 0.23
UBA3-210ENST00000485424 ZDHHC15Q96MV8 337 aa16.5■□□□□ 0.23
UBA3-210ENST00000485424 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
UBA3-210ENST00000485424 GNL3LQ9NVN8 582 aaKnown RBP16.5■□□□□ 0.23
UBA3-210ENST00000485424 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
UBA3-210ENST00000485424 SNCAIPQ9Y6H5 919 aa16.5■□□□□ 0.23
UBA3-210ENST00000485424 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 FGFR2P21802 821 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 TRMT2AQ8IZ69 625 aaKnown RBP16.49■□□□□ 0.23
UBA3-210ENST00000485424 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 WDR66Q8TBY9 1149 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 SUGT1Q9Y2Z0 365 aa16.49■□□□□ 0.23
UBA3-210ENST00000485424 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
UBA3-210ENST00000485424 APOBEC3HQ6NTF7 200 aaKnown RBP16.48■□□□□ 0.23
UBA3-210ENST00000485424 FAM83AQ86UY5 434 aa16.48■□□□□ 0.23
UBA3-210ENST00000485424 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
UBA3-210ENST00000485424 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
UBA3-210ENST00000485424 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
UBA3-210ENST00000485424 TRIOBPQ9H2D6 2365 aa16.48■□□□□ 0.23
UBA3-210ENST00000485424 ALPK3Q96L96 1907 aa16.47■□□□□ 0.23
UBA3-210ENST00000485424 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
UBA3-210ENST00000485424 MAST2Q6P0Q8 1798 aa16.47■□□□□ 0.23
UBA3-210ENST00000485424 CIAO1O76071 339 aa16.47■□□□□ 0.23
UBA3-210ENST00000485424 RFX5P48382 616 aaPredicted RBP16.47■□□□□ 0.23
UBA3-210ENST00000485424 FKBP1CQ5VVH2 108 aa16.47■□□□□ 0.23
UBA3-210ENST00000485424 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
UBA3-210ENST00000485424 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
UBA3-210ENST00000485424 HHIPL2Q6UWX4 724 aa16.46■□□□□ 0.23
UBA3-210ENST00000485424 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
UBA3-210ENST00000485424 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
UBA3-210ENST00000485424 PTCH2Q9Y6C5 1203 aa16.46■□□□□ 0.23
UBA3-210ENST00000485424 IRF6O14896 467 aa16.45■□□□□ 0.22
UBA3-210ENST00000485424 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
UBA3-210ENST00000485424 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
UBA3-210ENST00000485424 GNAI3P08754 354 aa16.45■□□□□ 0.22
UBA3-210ENST00000485424 CETPP11597 493 aa16.45■□□□□ 0.22
UBA3-210ENST00000485424 EN2P19622 333 aaPredicted RBP16.45■□□□□ 0.22
UBA3-210ENST00000485424 IL15P40933 162 aaPredicted RBP16.45■□□□□ 0.22
UBA3-210ENST00000485424 PPIL2Q13356 520 aa16.45■□□□□ 0.22
UBA3-210ENST00000485424 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
UBA3-210ENST00000485424 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
UBA3-210ENST00000485424 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
UBA3-210ENST00000485424 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 LDHBP07195 334 aaKnown RBP16.44■□□□□ 0.22
UBA3-210ENST00000485424 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
UBA3-210ENST00000485424 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 DCAF15Q66K64 600 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
UBA3-210ENST00000485424 TLR2O60603 784 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 SNAPC2Q13487 334 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
UBA3-210ENST00000485424 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
UBA3-210ENST00000485424 MEIS3Q99687 375 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 ZNF341Q9BYN7 854 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 PA2G4Q9UQ80 394 aaKnown RBP16.43■□□□□ 0.22
UBA3-210ENST00000485424 DAGLAQ9Y4D2 1042 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 SZT2Q5T011 3432 aa16.43■□□□□ 0.22
UBA3-210ENST00000485424 RANBP2P49792 3224 aaKnown RBP16.43■□□□□ 0.22
UBA3-210ENST00000485424 SEMA3EO15041 775 aa16.42■□□□□ 0.22
UBA3-210ENST00000485424 INPP5BP32019 993 aa16.42■□□□□ 0.22
UBA3-210ENST00000485424 LACTBP83111 547 aaPredicted RBP16.42■□□□□ 0.22
UBA3-210ENST00000485424 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
UBA3-210ENST00000485424 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
UBA3-210ENST00000485424 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
UBA3-210ENST00000485424 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 PRDX5P30044 214 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 PPATQ06203 517 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 FAM151AQ8WW52 585 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 MYH1P12882 1939 aa16.41■□□□□ 0.22
UBA3-210ENST00000485424 PLXNB2O15031 1838 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 TCP10Q12799 353 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 NFIAQ12857 509 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 KIF22Q14807 665 aa16.4■□□□□ 0.22
UBA3-210ENST00000485424 CDC42EP5Q6NZY7 148 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms