RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PDIA4P13667 645 aaKnown RBP19.7■□□□□ 0.74
CTSA-207ENST00000484855 LARP1BQ659C4 914 aaKnown RBP19.7■□□□□ 0.74
CTSA-207ENST00000484855 GPHNQ9NQX3 736 aaPredicted RBP19.7■□□□□ 0.74
CTSA-207ENST00000484855 MTMR6Q9Y217 621 aa19.7■□□□□ 0.74
CTSA-207ENST00000484855 ATP6V0A2Q9Y487 856 aa19.7■□□□□ 0.74
CTSA-207ENST00000484855 MYH2Q9UKX2 1941 aa19.69■□□□□ 0.74
CTSA-207ENST00000484855 B4E1Z4 1266 aa19.69■□□□□ 0.74
CTSA-207ENST00000484855 JAK2O60674 1132 aa19.69■□□□□ 0.74
CTSA-207ENST00000484855 F13A1P00488 732 aa19.69■□□□□ 0.74
CTSA-207ENST00000484855 PDIA3P30101 505 aaKnown RBP19.69■□□□□ 0.74
CTSA-207ENST00000484855 EVCP57679 992 aa19.69■□□□□ 0.74
CTSA-207ENST00000484855 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
CTSA-207ENST00000484855 POLLQ9UGP5 575 aa19.69■□□□□ 0.74
CTSA-207ENST00000484855 VPS37CA5D8V6 355 aaPredicted RBP19.68■□□□□ 0.74
CTSA-207ENST00000484855 ALDH1B1P30837 517 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 CCT2P78371 535 aaKnown RBP19.68■□□□□ 0.74
CTSA-207ENST00000484855 AKNAD1Q5T1N1 836 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 CNNM2Q9H8M5 875 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 CD209Q9NNX6 404 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 LMBRD1Q9NUN5 540 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 C6orf229H3BNL8 230 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 IGSF3O75054 1194 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
CTSA-207ENST00000484855 CYB5R4Q7L1T6 521 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 STAG1Q8WVM7 1258 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
CTSA-207ENST00000484855 KLF18A0A0U1RQI7 1052 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 IL1R1P14778 569 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 FOXD4L6Q3SYB3 417 aaPredicted RBP19.67■□□□□ 0.74
CTSA-207ENST00000484855 FOXD4L3Q6VB84 417 aaPredicted RBP19.67■□□□□ 0.74
CTSA-207ENST00000484855 MFSD6Q6ZSS7 791 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 CHMP4CQ96CF2 233 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 AATFQ9NY61 560 aaKnown RBP eCLIP19.67■□□□□ 0.74
CTSA-207ENST00000484855 PRPF40AO75400 957 aaKnown RBP19.67■□□□□ 0.74
CTSA-207ENST00000484855 PPARAQ07869 468 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 SF3B2Q13435 895 aaKnown RBP19.67■□□□□ 0.74
CTSA-207ENST00000484855 SMARCC2Q8TAQ2 1214 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 NKX2-3Q8TAU0 364 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 KRT23Q9C075 422 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 GZF1Q9H116 711 aaPredicted RBP19.67■□□□□ 0.74
CTSA-207ENST00000484855 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
CTSA-207ENST00000484855 NSUN7Q8NE18 718 aaKnown RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 NCOA5Q9HCD5 579 aaKnown RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 INCENPQ9NQS7 918 aa19.66■□□□□ 0.74
CTSA-207ENST00000484855 BRPF3Q9ULD4 1205 aa19.66■□□□□ 0.74
CTSA-207ENST00000484855 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 GOLGA8BA8MQT2 603 aa19.66■□□□□ 0.74
CTSA-207ENST00000484855 SH2B2O14492 632 aaPredicted RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 TMEM87BQ96K49 555 aa19.66■□□□□ 0.74
CTSA-207ENST00000484855 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 RNF41Q9H4P4 317 aaPredicted RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 TACC3Q9Y6A5 838 aa19.66■□□□□ 0.74
CTSA-207ENST00000484855 DDX49Q9Y6V7 483 aaKnown RBP19.66■□□□□ 0.74
CTSA-207ENST00000484855 MINDY4BA8MYZ0 360 aa19.65■□□□□ 0.74
CTSA-207ENST00000484855 BAG6P46379 1132 aa19.65■□□□□ 0.74
CTSA-207ENST00000484855 GIMAP6Q6P9H5 292 aa19.65■□□□□ 0.74
CTSA-207ENST00000484855 FAM184AQ8NB25 1140 aa19.65■□□□□ 0.74
CTSA-207ENST00000484855 DDX11Q96FC9 970 aa19.65■□□□□ 0.74
CTSA-207ENST00000484855 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 KDM4AO75164 1064 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 CTDNEP1O95476 244 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 GSTO1P78417 241 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.74
CTSA-207ENST00000484855 KLHL40Q2TBA0 621 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 CDC37L1Q7L3B6 337 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 TOMM22Q9NS69 142 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 ANAPC4Q9UJX5 808 aa19.64■□□□□ 0.74
CTSA-207ENST00000484855 RRP12Q5JTH9 1297 aaKnown RBP19.64■□□□□ 0.73
CTSA-207ENST00000484855 C2CD5Q86YS7 1000 aa19.64■□□□□ 0.73
CTSA-207ENST00000484855 ZNF622Q969S3 477 aaKnown RBP eCLIP19.64■□□□□ 0.73
CTSA-207ENST00000484855 TMX4Q9H1E5 349 aaPredicted RBP19.64■□□□□ 0.73
CTSA-207ENST00000484855 NAV1Q8NEY1 1877 aa19.64■□□□□ 0.73
CTSA-207ENST00000484855 STK11IPQ8N1F8 1099 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 MPNDQ8N594 471 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 CDK5RAP2Q96SN8 1893 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 GRIK5Q16478 980 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 OLFM4Q6UX06 510 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 ZSWIM5Q9P217 1185 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 KIF3AQ9Y496 699 aa19.63■□□□□ 0.73
CTSA-207ENST00000484855 MYH15Q9Y2K3 1946 aa19.62■□□□□ 0.73
CTSA-207ENST00000484855 SLX4Q8IY92 1834 aa19.62■□□□□ 0.73
CTSA-207ENST00000484855 TMEM67Q5HYA8 995 aa19.62■□□□□ 0.73
CTSA-207ENST00000484855 DPP8Q6V1X1 898 aaPredicted RBP19.62■□□□□ 0.73
CTSA-207ENST00000484855 ATP8A2Q9NTI2 1148 aa19.62■□□□□ 0.73
CTSA-207ENST00000484855 HPS5Q9UPZ3 1129 aa19.62■□□□□ 0.73
CTSA-207ENST00000484855 H0YIN7 160 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 RIMBP2O15034 1052 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 DHX16O60231 1041 aaKnown RBP19.61■□□□□ 0.73
CTSA-207ENST00000484855 IGDCC4Q8TDY8 1250 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 LY9Q9HBG7 655 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 IFIT3O14879 490 aaKnown RBP19.61■□□□□ 0.73
CTSA-207ENST00000484855 DIXDC1Q155Q3 683 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 STYK1Q6J9G0 422 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 CTR9Q6PD62 1173 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 DEFB132Q7Z7B7 95 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 RAB11FIP4Q86YS3 637 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 TBC1D22AQ8WUA7 517 aa19.61■□□□□ 0.73
CTSA-207ENST00000484855 NOL10Q9BSC4 688 aaKnown RBP19.61■□□□□ 0.73
CTSA-207ENST00000484855 DCP1AQ9NPI6 582 aaPredicted RBP19.61■□□□□ 0.73
CTSA-207ENST00000484855 H3BQV1 296 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms