RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RPS26P11Q5JNZ5 115 aaPredicted RBP8.8□□□□□ -1
SCAF11-207ENST00000484275 ZNF765Q7L2R6 523 aa8.8□□□□□ -1
SCAF11-207ENST00000484275 ABI1Q8IZP0 508 aa8.8□□□□□ -1
SCAF11-207ENST00000484275 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
SCAF11-207ENST00000484275 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
SCAF11-207ENST00000484275 DMRTB1Q96MA1 342 aa8.8□□□□□ -1
SCAF11-207ENST00000484275 CCDC86Q9H6F5 360 aaKnown RBP8.8□□□□□ -1
SCAF11-207ENST00000484275 ZFYVE1Q9HBF4 777 aa8.8□□□□□ -1
SCAF11-207ENST00000484275 CCDC39Q9UFE4 941 aa8.8□□□□□ -1
SCAF11-207ENST00000484275 CYP26A1O43174 497 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 PRNPP04156 253 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 LIG1P18858 919 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 AP3B2Q13367 1082 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 MAP7Q14244 749 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 TMC7Q7Z402 723 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 FMNL2Q96PY5 1086 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 ZC3H12CQ9C0D7 883 aaKnown RBP8.79□□□□□ -1
SCAF11-207ENST00000484275 LGR6Q9HBX8 967 aa8.79□□□□□ -1
SCAF11-207ENST00000484275 TMPRSS2O15393 492 aa8.78□□□□□ -1
SCAF11-207ENST00000484275 ZNF862O60290 1169 aa8.78□□□□□ -1
SCAF11-207ENST00000484275 TRAK1Q9UPV9 953 aa8.78□□□□□ -1
SCAF11-207ENST00000484275 DAGLAQ9Y4D2 1042 aa8.78□□□□□ -1
SCAF11-207ENST00000484275 SYNGAP1Q96PV0 1343 aa8.78□□□□□ -1
SCAF11-207ENST00000484275 PAX4O43316 350 aa8.77□□□□□ -1.01
SCAF11-207ENST00000484275 FCGRTP55899 365 aa8.76□□□□□ -1.01
SCAF11-207ENST00000484275 COL19A1Q14993 1142 aa8.76□□□□□ -1.01
SCAF11-207ENST00000484275 GOLGA2P5Q9HBQ8 144 aa8.76□□□□□ -1.01
SCAF11-207ENST00000484275 CRIM1Q9NZV1 1036 aa8.76□□□□□ -1.01
SCAF11-207ENST00000484275 ZC3H7BQ9UGR2 993 aaKnown RBP8.76□□□□□ -1.01
SCAF11-207ENST00000484275 ANGEL1Q9UNK9 670 aaKnown RBP8.76□□□□□ -1.01
SCAF11-207ENST00000484275 PCDHGC5Q9Y5F6 944 aa8.76□□□□□ -1.01
SCAF11-207ENST00000484275 DSC3Q14574 896 aa8.75□□□□□ -1.01
SCAF11-207ENST00000484275 PDZD3Q86UT5 571 aa8.75□□□□□ -1.01
SCAF11-207ENST00000484275 STK35Q8TDR2 534 aa8.75□□□□□ -1.01
SCAF11-207ENST00000484275 BCO2Q9BYV7 579 aa8.75□□□□□ -1.01
SCAF11-207ENST00000484275 LRRC4CQ9HCJ2 640 aa8.75□□□□□ -1.01
SCAF11-207ENST00000484275 BSDC1Q9NW68 430 aaPredicted RBP8.75□□□□□ -1.01
SCAF11-207ENST00000484275 GNEQ9Y223 722 aaKnown RBP8.75□□□□□ -1.01
SCAF11-207ENST00000484275 GSTP1P09211 210 aaKnown RBP8.74□□□□□ -1.01
SCAF11-207ENST00000484275 KIF4BQ2VIQ3 1234 aa8.74□□□□□ -1.01
SCAF11-207ENST00000484275 DUSP27Q5VZP5 1158 aa8.74□□□□□ -1.01
SCAF11-207ENST00000484275 DTHD1Q6ZMT9 781 aa8.74□□□□□ -1.01
SCAF11-207ENST00000484275 VSIG10LQ86VR7 867 aa8.74□□□□□ -1.01
SCAF11-207ENST00000484275 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
SCAF11-207ENST00000484275 DCTN4Q9UJW0 460 aa8.74□□□□□ -1.01
SCAF11-207ENST00000484275 PDE4CQ08493 712 aa8.73□□□□□ -1.01
SCAF11-207ENST00000484275 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
SCAF11-207ENST00000484275 DISC1Q9NRI5 854 aa8.73□□□□□ -1.01
SCAF11-207ENST00000484275 TMEM39AQ9NV64 488 aa8.73□□□□□ -1.01
SCAF11-207ENST00000484275 BIN2Q9UBW5 565 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-207ENST00000484275 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
SCAF11-207ENST00000484275 NXPE4Q6UWF7 544 aa8.72□□□□□ -1.01
SCAF11-207ENST00000484275 CBLL1Q75N03 491 aa8.72□□□□□ -1.01
SCAF11-207ENST00000484275 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-207ENST00000484275 TREHO43280 583 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 ID3Q02535 119 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 CDK5R2Q13319 367 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
SCAF11-207ENST00000484275 WFDC3Q8IUB2 231 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 PAK6Q9NQU5 681 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-207ENST00000484275 KRT82Q9NSB4 513 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 NLRP2Q9NX02 1062 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 RNF114Q9Y508 228 aa8.71□□□□□ -1.02
SCAF11-207ENST00000484275 PNMA6FA0A0J9YX94 578 aa8.7□□□□□ -1.02
SCAF11-207ENST00000484275 SLFN14P0C7P3 912 aa8.7□□□□□ -1.02
SCAF11-207ENST00000484275 TTLL4Q14679 1199 aa8.7□□□□□ -1.02
SCAF11-207ENST00000484275 ENOX2Q16206 610 aaKnown RBP8.7□□□□□ -1.02
SCAF11-207ENST00000484275 TP53INP2Q8IXH6 220 aa8.7□□□□□ -1.02
SCAF11-207ENST00000484275 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
SCAF11-207ENST00000484275 U3KQE9 123 aa8.7□□□□□ -1.02
SCAF11-207ENST00000484275 BRD1O95696 1058 aa8.69□□□□□ -1.02
SCAF11-207ENST00000484275 SULF2Q8IWU5 870 aa8.69□□□□□ -1.02
SCAF11-207ENST00000484275 C3orf58Q8NDZ4 430 aa8.69□□□□□ -1.02
SCAF11-207ENST00000484275 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
SCAF11-207ENST00000484275 KCNB2Q92953 911 aa8.69□□□□□ -1.02
SCAF11-207ENST00000484275 ATXN3LQ9H3M9 355 aa8.69□□□□□ -1.02
SCAF11-207ENST00000484275 NEFMP07197 916 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 FAM87AP0C7U9 286 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 HCLS1P14317 486 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-207ENST00000484275 MAPK1P28482 360 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 TXKP42681 527 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 PLCB3Q01970 1234 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 PPP2R3AQ06190 1150 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 SMYD4Q8IYR2 804 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-207ENST00000484275 BCL7CQ8WUZ0 217 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-207ENST00000484275 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 PIDD1Q9HB75 910 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
SCAF11-207ENST00000484275 XRCC5P13010 732 aaKnown RBP8.67□□□□□ -1.02
SCAF11-207ENST00000484275 ARNTP27540 789 aa8.67□□□□□ -1.02
SCAF11-207ENST00000484275 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
SCAF11-207ENST00000484275 FAM181AQ8N9Y4 354 aa8.67□□□□□ -1.02
SCAF11-207ENST00000484275 KRTAP9-9Q9BYP9 154 aa8.67□□□□□ -1.02
SCAF11-207ENST00000484275 KRTAP9-4Q9BYQ2 154 aa8.67□□□□□ -1.02
SCAF11-207ENST00000484275 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
SCAF11-207ENST00000484275 LEFTY1O75610 366 aa8.66□□□□□ -1.02
SCAF11-207ENST00000484275 ZNF252P-AS1Q0IIN9 211 aa8.66□□□□□ -1.02
SCAF11-207ENST00000484275 ZC3H12AQ5D1E8 599 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms