RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 OTOFQ9HC10 1997 aa8.46□□□□□ -1.06
BRCA1-216ENST00000484087 THSD7BQ9C0I4 1608 aa8.46□□□□□ -1.06
BRCA1-216ENST00000484087 CLRN2A0PK11 232 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 WNT10BO00744 389 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 PHKA1P46020 1223 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 VEGFBP49765 207 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 EMP3P54852 163 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 TFCP2Q12800 502 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 PUM3Q15397 648 aaKnown RBP8.45□□□□□ -1.06
BRCA1-216ENST00000484087 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 MFSD14BQ5SR56 506 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 C15orf52Q6ZUT6 534 aaKnown RBP8.45□□□□□ -1.06
BRCA1-216ENST00000484087 TDRD7Q8NHU6 1098 aaKnown RBP8.45□□□□□ -1.06
BRCA1-216ENST00000484087 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 PGAP2Q9UHJ9 254 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 SSC5DA1L4H1 1573 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 APBB1O00213 710 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 AOC2O75106 756 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 RAB11FIP3O75154 756 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 TIMM10P62072 90 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 PRKG1Q13976 671 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 PI16Q6UXB8 463 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 FBXO33Q7Z6M2 555 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 VPS37DQ86XT2 251 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 DCPSQ96C86 337 aaKnown RBP8.45□□□□□ -1.06
BRCA1-216ENST00000484087 CDCA5Q96FF9 252 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 LRRCC1Q9C099 1032 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 COPRSQ9NQ92 184 aa8.45□□□□□ -1.06
BRCA1-216ENST00000484087 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
BRCA1-216ENST00000484087 MYH2Q9UKX2 1941 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 FRAT2O75474 233 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-216ENST00000484087 SLC5A1P13866 664 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 RBM5P52756 815 aaKnown RBP eCLIP8.44□□□□□ -1.06
BRCA1-216ENST00000484087 CACNB3P54284 484 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 MKRN3Q13064 507 aaKnown RBP8.44□□□□□ -1.06
BRCA1-216ENST00000484087 MTX1Q13505 466 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 CFAP100Q494V2 611 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 CDC37L1Q7L3B6 337 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 ZIC5Q96T25 663 aa8.44□□□□□ -1.06
BRCA1-216ENST00000484087 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
BRCA1-216ENST00000484087 MYO3BQ8WXR4 1341 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 A0A1B0GUL7 405 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 CIAO1O76071 339 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 IFIT1P09914 478 aaKnown RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 HSPA1AP0DMV8 641 aaKnown RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 HSPA1BP0DMV9 641 aaKnown RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 IL15P40933 162 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 CAVIN4Q5BKX8 364 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 SAPCD2Q86UD0 394 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 SULF1Q8IWU6 871 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 SSH3Q8TE77 659 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 LPIN2Q92539 896 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 ZBED3Q96IU2 234 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 PRMT6Q96LA8 375 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 VEZTQ9HBM0 779 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 TLR7Q9NYK1 1049 aaKnown RBP8.43□□□□□ -1.06
BRCA1-216ENST00000484087 CEP126Q9P2H0 1117 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 EXOC6BQ9Y2D4 811 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 AKAP11Q9UKA4 1901 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 FAM205AQ6ZU69 1335 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 PAPPA2Q9BXP8 1791 aa8.43□□□□□ -1.06
BRCA1-216ENST00000484087 RASSF10A6NK89 507 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 CDC45O75419 566 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 SURF6O75683 361 aaKnown RBP8.42□□□□□ -1.06
BRCA1-216ENST00000484087 PRDX5P30044 214 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 OS9Q13438 667 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-216ENST00000484087 BECN1Q14457 450 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 DIXDC1Q155Q3 683 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 DEFB115Q30KQ5 88 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 TTC22Q5TAA0 569 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 ERC1Q8IUD2 1116 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 JMYQ8N9B5 988 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 KIF1BPQ96EK5 621 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 CAPNS2Q96L46 248 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 TDRD3Q9H7E2 651 aaKnown RBP8.42□□□□□ -1.06
BRCA1-216ENST00000484087 STK24Q9Y6E0 443 aa8.42□□□□□ -1.06
BRCA1-216ENST00000484087 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
BRCA1-216ENST00000484087 MAST2Q6P0Q8 1798 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-216ENST00000484087 CRKP46108 304 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 MFAP1P55081 439 aaKnown RBP8.41□□□□□ -1.06
BRCA1-216ENST00000484087 HUNKP57058 714 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 DLGAP5Q15398 846 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 OSBPL3Q9H4L5 887 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 GBA2Q9HCG7 927 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-216ENST00000484087 HDAC9Q9UKV0 1011 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 NDUFB9Q9Y6M9 179 aa8.41□□□□□ -1.06
BRCA1-216ENST00000484087 AK9Q5TCS8 1911 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 POTEB3A0JP26 581 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms