RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TIMM10P62072 90 aa24.56■■□□□ 1.52
HPS4-213ENST00000483631 VGLL4Q14135 290 aa24.56■■□□□ 1.52
HPS4-213ENST00000483631 TMEM57Q8N5G2 664 aa24.56■■□□□ 1.52
HPS4-213ENST00000483631 TNNQ9UQP3 1299 aa24.56■■□□□ 1.52
HPS4-213ENST00000483631 ZBED9Q6R2W3 1325 aa24.56■■□□□ 1.52
HPS4-213ENST00000483631 TFCP2Q12800 502 aa24.55■■□□□ 1.52
HPS4-213ENST00000483631 DIXDC1Q155Q3 683 aa24.55■■□□□ 1.52
HPS4-213ENST00000483631 CDC42EP5Q6NZY7 148 aa24.55■■□□□ 1.52
HPS4-213ENST00000483631 SLF2Q8IX21 1173 aa24.55■■□□□ 1.52
HPS4-213ENST00000483631 XAGE2Q96GT9 111 aa24.55■■□□□ 1.52
HPS4-213ENST00000483631 MS4A4AQ96JQ5 239 aa24.55■■□□□ 1.52
HPS4-213ENST00000483631 GTF2A2P52657 109 aa24.54■■□□□ 1.52
HPS4-213ENST00000483631 RASGRF1Q13972 1273 aa24.54■■□□□ 1.52
HPS4-213ENST00000483631 SPTY2D1Q68D10 685 aaPredicted RBP24.54■■□□□ 1.52
HPS4-213ENST00000483631 R3HDMLQ9H3Y0 253 aa24.54■■□□□ 1.52
HPS4-213ENST00000483631 AK9Q5TCS8 1911 aa24.54■■□□□ 1.52
HPS4-213ENST00000483631 SPDYE5A6NIY4 337 aa24.53■■□□□ 1.52
HPS4-213ENST00000483631 G3BP1Q13283 466 aaKnown RBP eCLIP24.53■■□□□ 1.52
HPS4-213ENST00000483631 ERO1BQ86YB8 467 aa24.53■■□□□ 1.52
HPS4-213ENST00000483631 FAM163AQ96GL9 167 aaPredicted RBP24.53■■□□□ 1.52
HPS4-213ENST00000483631 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.53■■□□□ 1.52
HPS4-213ENST00000483631 GAKO14976 1311 aa24.53■■□□□ 1.52
HPS4-213ENST00000483631 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
HPS4-213ENST00000483631 MLLT1Q03111 559 aaPredicted RBP24.52■■□□□ 1.52
HPS4-213ENST00000483631 WRNIP1Q96S55 665 aa24.52■■□□□ 1.52
HPS4-213ENST00000483631 ZNF341Q9BYN7 854 aa24.52■■□□□ 1.52
HPS4-213ENST00000483631 POLA2Q14181 598 aa24.51■■□□□ 1.51
HPS4-213ENST00000483631 FBXO46Q6PJ61 603 aaPredicted RBP24.51■■□□□ 1.51
HPS4-213ENST00000483631 FTSJ3Q8IY81 847 aaKnown RBP24.51■■□□□ 1.51
HPS4-213ENST00000483631 PTPN18Q99952 460 aa24.51■■□□□ 1.51
HPS4-213ENST00000483631 SNCAIPQ9Y6H5 919 aa24.51■■□□□ 1.51
HPS4-213ENST00000483631 DZIP1Q86YF9 867 aaKnown RBP24.5■■□□□ 1.51
HPS4-213ENST00000483631 SSH3Q8TE77 659 aa24.5■■□□□ 1.51
HPS4-213ENST00000483631 IDI2Q9BXS1 227 aa24.5■■□□□ 1.51
HPS4-213ENST00000483631 ZCCHC17Q9NP64 241 aaKnown RBP24.5■■□□□ 1.51
HPS4-213ENST00000483631 GPR108Q9NPR9 543 aa24.5■■□□□ 1.51
HPS4-213ENST00000483631 USP40Q9NVE5 1235 aa24.5■■□□□ 1.51
HPS4-213ENST00000483631 HPS5Q9UPZ3 1129 aa24.5■■□□□ 1.51
HPS4-213ENST00000483631 ATP8B2P98198 1209 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 NFIAQ12857 509 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 CRHR2Q13324 411 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 OTUD5Q96G74 571 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 NEUROD6Q96NK8 337 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 FAM198AQ9UFP1 575 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 ABCF2Q9UG63 623 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 ZNF112Q9UJU3 913 aa24.49■■□□□ 1.51
HPS4-213ENST00000483631 CCL15-CCL14A0A0B4J2E2 113 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 ENTPD3O75355 529 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 SLC34A2O95436 690 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 ARID4AP29374 1257 aaPredicted RBP24.48■■□□□ 1.51
HPS4-213ENST00000483631 PPIL2Q13356 520 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 CCL15Q16663 113 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 RFX7Q2KHR2 1363 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 CNKSR2Q8WXI2 1034 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 ERO1AQ96HE7 468 aa24.48■■□□□ 1.51
HPS4-213ENST00000483631 DOCK2Q92608 1830 aa24.47■■□□□ 1.51
HPS4-213ENST00000483631 MAP4K4O95819 1239 aaPredicted RBP24.47■■□□□ 1.51
HPS4-213ENST00000483631 CETPP11597 493 aa24.47■■□□□ 1.51
HPS4-213ENST00000483631 PPATQ06203 517 aa24.47■■□□□ 1.51
HPS4-213ENST00000483631 GORABQ5T7V8 394 aa24.47■■□□□ 1.51
HPS4-213ENST00000483631 ERICH6Q7L0X2 663 aa24.47■■□□□ 1.51
HPS4-213ENST00000483631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.47■■□□□ 1.51
HPS4-213ENST00000483631 MROH7-TTC4A0A0A0MT08 1334 aa24.46■■□□□ 1.51
HPS4-213ENST00000483631 UQCRFS1P1P0C7P4 283 aa24.46■■□□□ 1.51
HPS4-213ENST00000483631 TCP10Q12799 353 aa24.46■■□□□ 1.51
HPS4-213ENST00000483631 SNAPC2Q13487 334 aa24.46■■□□□ 1.51
HPS4-213ENST00000483631 SPATA5Q8NB90 893 aa24.46■■□□□ 1.51
HPS4-213ENST00000483631 ZKSCAN4Q969J2 545 aaPredicted RBP24.46■■□□□ 1.51
HPS4-213ENST00000483631 HMG20BQ9P0W2 317 aa24.46■■□□□ 1.51
HPS4-213ENST00000483631 ZBTB7BO15156 539 aaPredicted RBP24.45■■□□□ 1.5
HPS4-213ENST00000483631 IGSF3O75054 1194 aa24.45■■□□□ 1.5
HPS4-213ENST00000483631 NPM3O75607 178 aaKnown RBP24.45■■□□□ 1.5
HPS4-213ENST00000483631 WDHD1O75717 1129 aaPredicted RBP24.45■■□□□ 1.5
HPS4-213ENST00000483631 NOL9Q5SY16 702 aaKnown RBP24.45■■□□□ 1.5
HPS4-213ENST00000483631 MIGA2Q7L4E1 593 aa24.45■■□□□ 1.5
HPS4-213ENST00000483631 ITPRIPQ8IWB1 547 aa24.45■■□□□ 1.5
HPS4-213ENST00000483631 ZFYVE28Q9HCC9 887 aa24.45■■□□□ 1.5
HPS4-213ENST00000483631 GPR75-ASB3A0A0A6YYF3 556 aa24.44■■□□□ 1.5
HPS4-213ENST00000483631 LDHCP07864 332 aa24.44■■□□□ 1.5
HPS4-213ENST00000483631 GSTO1P78417 241 aa24.44■■□□□ 1.5
HPS4-213ENST00000483631 SP3Q02447 781 aa24.44■■□□□ 1.5
HPS4-213ENST00000483631 NOP58Q9Y2X3 529 aaKnown RBP24.44■■□□□ 1.5
HPS4-213ENST00000483631 ATRNL1Q5VV63 1379 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 IRF6O14896 467 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 RLBP1P12271 317 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 INPP5BP32019 993 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 RGS3P49796 1198 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 MAP3K10Q02779 954 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 MECOMQ03112 1051 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 TAF1CQ15572 869 aaPredicted RBP24.43■■□□□ 1.5
HPS4-213ENST00000483631 OTOP1Q7RTM1 612 aa24.43■■□□□ 1.5
HPS4-213ENST00000483631 MS4A1P11836 297 aa24.42■■□□□ 1.5
HPS4-213ENST00000483631 BTDP43251 543 aa24.42■■□□□ 1.5
HPS4-213ENST00000483631 FAM43AQ8N2R8 423 aa24.42■■□□□ 1.5
HPS4-213ENST00000483631 KCNH4Q9UQ05 1017 aa24.42■■□□□ 1.5
HPS4-213ENST00000483631 TRIM17Q9Y577 477 aa24.42■■□□□ 1.5
HPS4-213ENST00000483631 SURF6O75683 361 aaKnown RBP24.41■■□□□ 1.5
HPS4-213ENST00000483631 MCAMP43121 646 aa24.41■■□□□ 1.5
HPS4-213ENST00000483631 ARHGEF6Q15052 776 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms