RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TRAF7Q6Q0C0 670 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 SLC51AQ86UW1 340 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 PRDM9Q9NQV7 894 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 KDM3BQ7LBC6 1761 aa7.63□□□□□ -1.19
CSDE1-207ENST00000483407 H7C1D1 291 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 CA12O43570 354 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 RAD17O75943 681 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 PTK2Q05397 1052 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 CDC37L1Q7L3B6 337 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 ABHD8Q96I13 439 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 HHIPL1Q96JK4 782 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 OCSTAMPQ9BR26 566 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 GLIS2Q9BZE0 524 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-207ENST00000483407 ZNF408Q9H9D4 720 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 PGAP2Q9UHJ9 254 aa7.62□□□□□ -1.19
CSDE1-207ENST00000483407 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
CSDE1-207ENST00000483407 CHL1O00533 1208 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 HOXB7P09629 217 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 MCCD1P59942 119 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-207ENST00000483407 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
CSDE1-207ENST00000483407 SAPCD2Q86UD0 394 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 PLBD2Q8NHP8 589 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 DPF2Q92785 391 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 MTRQ99707 1265 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 CHPF2Q9P2E5 772 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 DBF4Q9UBU7 674 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-207ENST00000483407 CNOT7Q9UIV1 285 aaKnown RBP7.61□□□□□ -1.19
CSDE1-207ENST00000483407 NSFL1CQ9UNZ2 370 aaKnown RBP7.61□□□□□ -1.19
CSDE1-207ENST00000483407 LTBP1Q14766 1721 aa7.61□□□□□ -1.19
CSDE1-207ENST00000483407 NUP98P52948 1817 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 CCDC85CA6NKD9 419 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 PIK3CDO00329 1044 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 TLL1O43897 1013 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 AOC2O75106 756 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 HSP90B1P14625 803 aaKnown RBP7.6□□□□□ -1.19
CSDE1-207ENST00000483407 SF3B3Q15393 1217 aaKnown RBP7.6□□□□□ -1.19
CSDE1-207ENST00000483407 TJAP1Q5JTD0 557 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 CCDC146Q8IYE0 955 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 TRPM4Q8TD43 1214 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 RUNDC1Q96C34 613 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 EYA3Q99504 573 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 HYPKQ9NX55 129 aa7.6□□□□□ -1.19
CSDE1-207ENST00000483407 MYBBP1AQ9BQG0 1328 aaKnown RBP7.59□□□□□ -1.19
CSDE1-207ENST00000483407 YDJCA8MPS7 323 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 PSMD14O00487 310 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 IRS4O14654 1257 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-207ENST00000483407 RPS12P25398 132 aaKnown RBP7.59□□□□□ -1.19
CSDE1-207ENST00000483407 HIRAP54198 1017 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-207ENST00000483407 HUNKP57058 714 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 NOGQ13253 232 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 KRT24Q2M2I5 525 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 CELF1Q92879 486 aaKnown RBP7.59□□□□□ -1.19
CSDE1-207ENST00000483407 FAM89AQ96GI7 184 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 ISCA1Q9BUE6 129 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 DBNDD1Q9H9R9 158 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 CEP126Q9P2H0 1117 aa7.59□□□□□ -1.19
CSDE1-207ENST00000483407 ECE2O60344 883 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 BRD1O95696 1058 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 RPS8P62241 208 aaKnown RBP7.58□□□□□ -1.2
CSDE1-207ENST00000483407 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
CSDE1-207ENST00000483407 TBC1D10BQ4KMP7 808 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-207ENST00000483407 DUSP27Q5VZP5 1158 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 PTCRAQ6ISU1 281 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-207ENST00000483407 KRT26Q7Z3Y9 468 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 USP48Q86UV5 1035 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 PHTF2Q8N3S3 785 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 C2orf69Q8N8R5 385 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 ZNF428Q96B54 188 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 DCPSQ96C86 337 aaKnown RBP7.58□□□□□ -1.2
CSDE1-207ENST00000483407 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
CSDE1-207ENST00000483407 IL21Q9HBE4 155 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 DLG5Q8TDM6 1919 aa7.58□□□□□ -1.2
CSDE1-207ENST00000483407 THSD7BQ9C0I4 1608 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 SHTN1A0MZ66 631 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 SKIP12755 728 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 GPSM2P81274 684 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 MLLT1Q03111 559 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-207ENST00000483407 CALD1Q05682 793 aaKnown RBP7.57□□□□□ -1.2
CSDE1-207ENST00000483407 ELOAQ14241 798 aaKnown RBP7.57□□□□□ -1.2
CSDE1-207ENST00000483407 SH3BP5LQ7L8J4 393 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 ZBTB38Q8NAP3 1195 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-207ENST00000483407 TBC1D16Q8TBP0 767 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 ZNF516Q92618 1163 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 ARHGAP9Q9BRR9 750 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 CHMP4AQ9BY43 222 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 GBA2Q9HCG7 927 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-207ENST00000483407 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
CSDE1-207ENST00000483407 USP17L3A6NCW0 530 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 USP17L4A6NCW7 530 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 PATL2C9JE40 543 aaKnown RBP7.56□□□□□ -1.2
CSDE1-207ENST00000483407 UFL1O94874 794 aa7.56□□□□□ -1.2
CSDE1-207ENST00000483407 DDX10Q13206 875 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms