RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SLC9C1Q4G0N8 1177 aa17.4■□□□□ 0.38
VARS-226ENST00000483275 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
VARS-226ENST00000483275 FAM83AQ86UY5 434 aa17.4■□□□□ 0.38
VARS-226ENST00000483275 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
VARS-226ENST00000483275 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
VARS-226ENST00000483275 SH3TC2Q8TF17 1288 aa17.4■□□□□ 0.38
VARS-226ENST00000483275 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
VARS-226ENST00000483275 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
VARS-226ENST00000483275 CETPP11597 493 aa17.39■□□□□ 0.37
VARS-226ENST00000483275 ATP2B3Q16720 1220 aa17.39■□□□□ 0.37
VARS-226ENST00000483275 CDC42EP5Q6NZY7 148 aa17.39■□□□□ 0.37
VARS-226ENST00000483275 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
VARS-226ENST00000483275 ADORA1P30542 326 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 PPIL2Q13356 520 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 SNAPC2Q13487 334 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 HHIPL2Q6UWX4 724 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 LPIN2Q92539 896 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 CPA4Q9UI42 421 aa17.38■□□□□ 0.37
VARS-226ENST00000483275 MGAMO43451 1857 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 PTPRFP10586 1907 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 TLR2O60603 784 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 UBTFL1P0CB47 393 aaPredicted RBP17.37■□□□□ 0.37
VARS-226ENST00000483275 CTGFP29279 349 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 PHKA1P46020 1223 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 DCAF15Q66K64 600 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 WDR66Q8TBY9 1149 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 SUGT1Q9Y2Z0 365 aa17.37■□□□□ 0.37
VARS-226ENST00000483275 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
VARS-226ENST00000483275 SLURP2P0DP57 97 aa17.36■□□□□ 0.37
VARS-226ENST00000483275 LACTBP83111 547 aaPredicted RBP17.36■□□□□ 0.37
VARS-226ENST00000483275 FAM151AQ8WW52 585 aa17.36■□□□□ 0.37
VARS-226ENST00000483275 FAM198AQ9UFP1 575 aa17.36■□□□□ 0.37
VARS-226ENST00000483275 PHIPQ8WWQ0 1821 aa17.35■□□□□ 0.37
VARS-226ENST00000483275 DOCK1Q14185 1865 aa17.35■□□□□ 0.37
VARS-226ENST00000483275 TRIOBPQ9H2D6 2365 aa17.35■□□□□ 0.37
VARS-226ENST00000483275 LDHBP07195 334 aaKnown RBP17.35■□□□□ 0.37
VARS-226ENST00000483275 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
VARS-226ENST00000483275 HOOK2Q96ED9 719 aa17.35■□□□□ 0.37
VARS-226ENST00000483275 MRIQ9BWK5 157 aa17.35■□□□□ 0.37
VARS-226ENST00000483275 NOB1Q9ULX3 412 aaKnown RBP17.35■□□□□ 0.37
VARS-226ENST00000483275 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
VARS-226ENST00000483275 MEIS3Q99687 375 aa17.34■□□□□ 0.37
VARS-226ENST00000483275 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
VARS-226ENST00000483275 USP40Q9NVE5 1235 aa17.34■□□□□ 0.37
VARS-226ENST00000483275 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
VARS-226ENST00000483275 ATRNL1Q5VV63 1379 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 ADGRA2Q96PE1 1338 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 PDHXO00330 501 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 PPATQ06203 517 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 MOGSQ13724 837 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 HABP4Q5JVS0 413 aaKnown RBP17.33■□□□□ 0.36
VARS-226ENST00000483275 TRIM47Q96LD4 638 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 PCDH10Q9P2E7 1040 aa17.33■□□□□ 0.36
VARS-226ENST00000483275 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.33■□□□□ 0.36
VARS-226ENST00000483275 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
VARS-226ENST00000483275 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
VARS-226ENST00000483275 CIAO1O76071 339 aa17.32■□□□□ 0.36
VARS-226ENST00000483275 RGS3P49796 1198 aa17.32■□□□□ 0.36
VARS-226ENST00000483275 KIF22Q14807 665 aa17.32■□□□□ 0.36
VARS-226ENST00000483275 C17orf99Q6UX52 265 aa17.32■□□□□ 0.36
VARS-226ENST00000483275 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
VARS-226ENST00000483275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.32■□□□□ 0.36
VARS-226ENST00000483275 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 CYP2C8P10632 490 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 PSMC4P43686 418 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 RASGRF1Q13972 1273 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 MTFR1Q15390 333 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 ZCCHC17Q9NP64 241 aaKnown RBP17.31■□□□□ 0.36
VARS-226ENST00000483275 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
VARS-226ENST00000483275 KCNH4Q9UQ05 1017 aa17.31■□□□□ 0.36
VARS-226ENST00000483275 PICALMQ13492 652 aa17.3■□□□□ 0.36
VARS-226ENST00000483275 SH3BP5LQ7L8J4 393 aa17.3■□□□□ 0.36
VARS-226ENST00000483275 CCDC84Q86UT8 332 aaPredicted RBP17.3■□□□□ 0.36
VARS-226ENST00000483275 TRMT2AQ8IZ69 625 aaKnown RBP17.3■□□□□ 0.36
VARS-226ENST00000483275 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
VARS-226ENST00000483275 DDX4Q9NQI0 724 aaKnown RBP17.3■□□□□ 0.36
VARS-226ENST00000483275 ABCF2Q9UG63 623 aa17.3■□□□□ 0.36
VARS-226ENST00000483275 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
VARS-226ENST00000483275 SALL1Q9NSC2 1324 aa17.29■□□□□ 0.36
VARS-226ENST00000483275 FMNL1O95466 1100 aaPredicted RBP17.29■□□□□ 0.36
VARS-226ENST00000483275 OSBPP22059 807 aa17.29■□□□□ 0.36
VARS-226ENST00000483275 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
VARS-226ENST00000483275 TIMM10P62072 90 aa17.29■□□□□ 0.36
VARS-226ENST00000483275 NOL9Q5SY16 702 aaKnown RBP17.29■□□□□ 0.36
VARS-226ENST00000483275 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
VARS-226ENST00000483275 ZSCAN29Q8IWY8 852 aaPredicted RBP17.29■□□□□ 0.36
VARS-226ENST00000483275 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
VARS-226ENST00000483275 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
VARS-226ENST00000483275 RANBP2P49792 3224 aaKnown RBP17.29■□□□□ 0.36
VARS-226ENST00000483275 FAM196BA6NMK8 535 aa17.28■□□□□ 0.36
VARS-226ENST00000483275 PHF20L1A8MW92 1017 aa17.28■□□□□ 0.36
VARS-226ENST00000483275 TFCP2Q12800 502 aa17.28■□□□□ 0.36
VARS-226ENST00000483275 GPAT2Q6NUI2 795 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms