RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 HOXD10P28358 340 aa16.11■□□□□ 0.17
TMEM54-206ENST00000482771 CTGFP29279 349 aa16.11■□□□□ 0.17
TMEM54-206ENST00000482771 INPP5BP32019 993 aa16.11■□□□□ 0.17
TMEM54-206ENST00000482771 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
TMEM54-206ENST00000482771 VGLL2Q8N8G2 317 aa16.11■□□□□ 0.17
TMEM54-206ENST00000482771 SUGT1Q9Y2Z0 365 aa16.11■□□□□ 0.17
TMEM54-206ENST00000482771 OTOFQ9HC10 1997 aa16.11■□□□□ 0.17
TMEM54-206ENST00000482771 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
TMEM54-206ENST00000482771 PDHXO00330 501 aa16.1■□□□□ 0.17
TMEM54-206ENST00000482771 FMNL1O95466 1100 aaPredicted RBP16.1■□□□□ 0.17
TMEM54-206ENST00000482771 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
TMEM54-206ENST00000482771 TCP10Q12799 353 aa16.1■□□□□ 0.17
TMEM54-206ENST00000482771 FAM151AQ8WW52 585 aa16.1■□□□□ 0.17
TMEM54-206ENST00000482771 TRIM47Q96LD4 638 aa16.1■□□□□ 0.17
TMEM54-206ENST00000482771 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
TMEM54-206ENST00000482771 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
TMEM54-206ENST00000482771 ANKRD23Q86SG2 305 aa16.09■□□□□ 0.17
TMEM54-206ENST00000482771 RAET1EQ8TD07 263 aa16.09■□□□□ 0.17
TMEM54-206ENST00000482771 ZNF112Q9UJU3 913 aa16.09■□□□□ 0.17
TMEM54-206ENST00000482771 MAST3O60307 1309 aa16.09■□□□□ 0.17
TMEM54-206ENST00000482771 FGFR2P21802 821 aa16.08■□□□□ 0.16
TMEM54-206ENST00000482771 OSBPP22059 807 aa16.08■□□□□ 0.16
TMEM54-206ENST00000482771 GRK4P32298 578 aa16.08■□□□□ 0.16
TMEM54-206ENST00000482771 PUM3Q15397 648 aaKnown RBP16.08■□□□□ 0.16
TMEM54-206ENST00000482771 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
TMEM54-206ENST00000482771 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
TMEM54-206ENST00000482771 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.16
TMEM54-206ENST00000482771 CDC42EP5Q6NZY7 148 aa16.07■□□□□ 0.16
TMEM54-206ENST00000482771 NKX2-3Q8TAU0 364 aa16.07■□□□□ 0.16
TMEM54-206ENST00000482771 SHISA4Q96DD7 197 aa16.07■□□□□ 0.16
TMEM54-206ENST00000482771 USP44Q9H0E7 712 aa16.07■□□□□ 0.16
TMEM54-206ENST00000482771 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
TMEM54-206ENST00000482771 CCL5P13501 91 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 ZEB1P37275 1124 aaPredicted RBP16.06■□□□□ 0.16
TMEM54-206ENST00000482771 NFIAQ12857 509 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 MOGSQ13724 837 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
TMEM54-206ENST00000482771 RNF208Q9H0X6 261 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 DAGLAQ9Y4D2 1042 aa16.06■□□□□ 0.16
TMEM54-206ENST00000482771 MYPNQ86TC9 1320 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 EYA2O00167 538 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 ANP32CO43423 234 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 GJB1P08034 283 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 SLC5A1P13866 664 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 GJA8P48165 433 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 ZFPM1Q8IX07 1006 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 LPIN2Q92539 896 aa16.05■□□□□ 0.16
TMEM54-206ENST00000482771 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
TMEM54-206ENST00000482771 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
TMEM54-206ENST00000482771 CXCL11O14625 94 aa16.04■□□□□ 0.16
TMEM54-206ENST00000482771 CYP2C8P10632 490 aa16.04■□□□□ 0.16
TMEM54-206ENST00000482771 GPAT2Q6NUI2 795 aa16.04■□□□□ 0.16
TMEM54-206ENST00000482771 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
TMEM54-206ENST00000482771 ARAP2Q8WZ64 1704 aa16.04■□□□□ 0.16
TMEM54-206ENST00000482771 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 RPAP1Q9BWH6 1393 aaPredicted RBP16.03■□□□□ 0.16
TMEM54-206ENST00000482771 ADGRA2Q96PE1 1338 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 BCRP11274 1271 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 PRDX5P30044 214 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
TMEM54-206ENST00000482771 FCGRTP55899 365 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 UBXN2AP68543 259 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 PRKCZQ05513 592 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 NOL9Q5SY16 702 aaKnown RBP16.03■□□□□ 0.16
TMEM54-206ENST00000482771 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 ZHX2Q9Y6X8 837 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 SZT2Q5T011 3432 aa16.03■□□□□ 0.16
TMEM54-206ENST00000482771 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.16
TMEM54-206ENST00000482771 ATG9AQ7Z3C6 839 aa16.02■□□□□ 0.16
TMEM54-206ENST00000482771 UBE2Q1Q7Z7E8 422 aa16.02■□□□□ 0.16
TMEM54-206ENST00000482771 PARK7Q99497 189 aaKnown RBP16.02■□□□□ 0.16
TMEM54-206ENST00000482771 GNL3LQ9NVN8 582 aaKnown RBP16.02■□□□□ 0.16
TMEM54-206ENST00000482771 GABRQQ9UN88 632 aa16.02■□□□□ 0.16
TMEM54-206ENST00000482771 RANBP2P49792 3224 aaKnown RBP16.01■□□□□ 0.15
TMEM54-206ENST00000482771 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
TMEM54-206ENST00000482771 FASTKD5Q7L8L6 764 aaKnown RBP16.01■□□□□ 0.15
TMEM54-206ENST00000482771 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
TMEM54-206ENST00000482771 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
TMEM54-206ENST00000482771 PICK1Q9NRD5 415 aa16.01■□□□□ 0.15
TMEM54-206ENST00000482771 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
TMEM54-206ENST00000482771 NR2E3Q9Y5X4 410 aa16.01■□□□□ 0.15
TMEM54-206ENST00000482771 PTPRCP08575 1304 aa16■□□□□ 0.15
TMEM54-206ENST00000482771 AK9Q5TCS8 1911 aa16■□□□□ 0.15
TMEM54-206ENST00000482771 ADCY3O60266 1144 aa16■□□□□ 0.15
TMEM54-206ENST00000482771 SGPL1O95470 568 aa16■□□□□ 0.15
TMEM54-206ENST00000482771 SSH1Q8WYL5 1049 aa16■□□□□ 0.15
TMEM54-206ENST00000482771 SIL1Q9H173 461 aa16■□□□□ 0.15
TMEM54-206ENST00000482771 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
TMEM54-206ENST00000482771 PTPRAP18433 802 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 FLT3LGP49771 235 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 RGS3P49796 1198 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 GADL1Q6ZQY3 521 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 ZSCAN29Q8IWY8 852 aaPredicted RBP15.99■□□□□ 0.15
TMEM54-206ENST00000482771 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 DENND2AQ9ULE3 1009 aa15.99■□□□□ 0.15
TMEM54-206ENST00000482771 AFG3L2Q9Y4W6 797 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms