RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TDRD3Q9H7E2 651 aaKnown RBP15.98■□□□□ 0.15
HDAC1-208ENST00000482310 VEZTQ9HBM0 779 aa15.98■□□□□ 0.15
HDAC1-208ENST00000482310 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 WNT10BO00744 389 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 RNF113AO15541 343 aaKnown RBP15.97■□□□□ 0.15
HDAC1-208ENST00000482310 LDHCP07864 332 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 HIRAP54198 1017 aaPredicted RBP15.97■□□□□ 0.15
HDAC1-208ENST00000482310 ZSCAN25Q6NSZ9 544 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 SEC62Q99442 399 aaKnown RBP15.97■□□□□ 0.15
HDAC1-208ENST00000482310 MYH8P13535 1937 aa15.97■□□□□ 0.15
HDAC1-208ENST00000482310 GAKO14976 1311 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 M0R2C6 588 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 NMIQ13287 307 aaPredicted RBP15.96■□□□□ 0.15
HDAC1-208ENST00000482310 HHIPL2Q6UWX4 724 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 JMYQ8N9B5 988 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 KLRG1Q96E93 195 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 ZDHHC15Q96MV8 337 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 DIAPH3Q9NSV4 1193 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 USP40Q9NVE5 1235 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 GGA3Q9NZ52 723 aa15.96■□□□□ 0.15
HDAC1-208ENST00000482310 LAMB1P07942 1786 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 PCNTO95613 3336 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 A0A0D9SFI3 127 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 MAGEB6P1A0A0J9YX57 407 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 MYO1BO43795 1136 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 MBD4O95243 580 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 HDLBPQ00341 1268 aaKnown RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 LRRFIP1Q32MZ4 808 aaKnown RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 BMP2KLQ5H9B9 411 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 COL13A1Q5TAT6 717 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 ANGEL2Q5VTE6 544 aaKnown RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 APOBEC3HQ6NTF7 200 aaKnown RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 CWC27Q6UX04 472 aaKnown RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 CCDC129Q6ZRS4 1044 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 SH3RF3Q8TEJ3 882 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
HDAC1-208ENST00000482310 ARMT1Q9H993 441 aa15.95■□□□□ 0.14
HDAC1-208ENST00000482310 TCP10L2B9ZVM9 353 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
HDAC1-208ENST00000482310 FSTL1Q12841 308 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 PICALMQ13492 652 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 CDC42EP5Q6NZY7 148 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 USP50Q70EL3 339 aaPredicted RBP15.94■□□□□ 0.14
HDAC1-208ENST00000482310 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 APPBP2Q92624 585 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 OSBP2Q969R2 916 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 ZNF70Q9UC06 446 aaPredicted RBP15.94■□□□□ 0.14
HDAC1-208ENST00000482310 TRPM7Q96QT4 1865 aa15.94■□□□□ 0.14
HDAC1-208ENST00000482310 RFX7Q2KHR2 1363 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 GPR75-ASB3A0A0A6YYF3 556 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 BAG3O95817 575 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 TCP10Q12799 353 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 TEX11Q8IYF3 940 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 MTMR14Q8NCE2 650 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 AIDAQ96BJ3 306 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 ZBED3Q96IU2 234 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-208ENST00000482310 TMOD2Q9NZR1 351 aa15.93■□□□□ 0.14
HDAC1-208ENST00000482310 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
HDAC1-208ENST00000482310 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
HDAC1-208ENST00000482310 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
HDAC1-208ENST00000482310 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
HDAC1-208ENST00000482310 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
HDAC1-208ENST00000482310 ADM5C9JUS6 153 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 GPAA1O43292 621 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 PRKAB2O43741 272 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 CHMLP26374 656 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 USP5P45974 858 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 MMP14P50281 582 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 RHBDL3P58872 404 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 NFIAQ12857 509 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 DLK2Q6UY11 383 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 TGFBRAP1Q8WUH2 860 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 SDR42E1Q8WUS8 393 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
HDAC1-208ENST00000482310 FAM163AQ96GL9 167 aaPredicted RBP15.91■□□□□ 0.14
HDAC1-208ENST00000482310 RIOK1Q9BRS2 568 aaKnown RBP15.91■□□□□ 0.14
HDAC1-208ENST00000482310 MRIQ9BWK5 157 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
HDAC1-208ENST00000482310 LAMA4Q16363 1823 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 HIP1O00291 1037 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 CDC45O75419 566 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 PRAMEF18Q5VWM3 479 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 ZNF589Q86UQ0 364 aaPredicted RBP15.9■□□□□ 0.14
HDAC1-208ENST00000482310 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 GLIS2Q9BZE0 524 aaPredicted RBP15.9■□□□□ 0.14
HDAC1-208ENST00000482310 IL25Q9H293 177 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 DDX4Q9NQI0 724 aaKnown RBP15.9■□□□□ 0.14
HDAC1-208ENST00000482310 SAP30BPQ9UHR5 308 aaKnown RBP15.9■□□□□ 0.14
HDAC1-208ENST00000482310 SLC4A4Q9Y6R1 1079 aa15.9■□□□□ 0.14
HDAC1-208ENST00000482310 PLCG2P16885 1265 aa15.89■□□□□ 0.13
HDAC1-208ENST00000482310 MCMDC2Q4G0Z9 681 aa15.89■□□□□ 0.13
HDAC1-208ENST00000482310 KRT26Q7Z3Y9 468 aa15.89■□□□□ 0.13
HDAC1-208ENST00000482310 USP48Q86UV5 1035 aa15.89■□□□□ 0.13
HDAC1-208ENST00000482310 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms