RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TEKT1Q969V4 418 aa18.99■□□□□ 0.63
HDAC6-224ENST00000481929 FAM84BQ96KN1 310 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-224ENST00000481929 ZNF341Q9BYN7 854 aa18.99■□□□□ 0.63
HDAC6-224ENST00000481929 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
HDAC6-224ENST00000481929 CAPN2P17655 700 aa18.98■□□□□ 0.63
HDAC6-224ENST00000481929 GRIK5Q16478 980 aa18.98■□□□□ 0.63
HDAC6-224ENST00000481929 PARK7Q99497 189 aaKnown RBP18.98■□□□□ 0.63
HDAC6-224ENST00000481929 INPP5BP32019 993 aa18.97■□□□□ 0.63
HDAC6-224ENST00000481929 FKBP1CQ5VVH2 108 aa18.97■□□□□ 0.63
HDAC6-224ENST00000481929 TBC1D22AQ8WUA7 517 aa18.97■□□□□ 0.63
HDAC6-224ENST00000481929 KCNH4Q9UQ05 1017 aa18.97■□□□□ 0.63
HDAC6-224ENST00000481929 ADCY3O60266 1144 aa18.96■□□□□ 0.63
HDAC6-224ENST00000481929 TFRCP02786 760 aaKnown RBP18.96■□□□□ 0.63
HDAC6-224ENST00000481929 CHAF1AQ13111 956 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-224ENST00000481929 GPR153Q6NV75 609 aa18.96■□□□□ 0.63
HDAC6-224ENST00000481929 VPS37DQ86XT2 251 aa18.96■□□□□ 0.63
HDAC6-224ENST00000481929 ZDHHC15Q96MV8 337 aa18.96■□□□□ 0.63
HDAC6-224ENST00000481929 GABRQQ9UN88 632 aa18.96■□□□□ 0.63
HDAC6-224ENST00000481929 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-224ENST00000481929 BCRP11274 1271 aa18.95■□□□□ 0.62
HDAC6-224ENST00000481929 EPHA10Q5JZY3 1008 aa18.95■□□□□ 0.62
HDAC6-224ENST00000481929 MIGA2Q7L4E1 593 aa18.95■□□□□ 0.62
HDAC6-224ENST00000481929 DEFB123Q8N688 67 aa18.95■□□□□ 0.62
HDAC6-224ENST00000481929 IQSEC3Q9UPP2 1182 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-224ENST00000481929 INHAP05111 366 aa18.94■□□□□ 0.62
HDAC6-224ENST00000481929 MOGSQ13724 837 aa18.94■□□□□ 0.62
HDAC6-224ENST00000481929 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
HDAC6-224ENST00000481929 MAST3O60307 1309 aa18.94■□□□□ 0.62
HDAC6-224ENST00000481929 CYP2C8P10632 490 aa18.93■□□□□ 0.62
HDAC6-224ENST00000481929 ELNP15502 786 aa18.93■□□□□ 0.62
HDAC6-224ENST00000481929 BMP8BP34820 402 aa18.93■□□□□ 0.62
HDAC6-224ENST00000481929 APOBEC3HQ6NTF7 200 aaKnown RBP18.93■□□□□ 0.62
HDAC6-224ENST00000481929 GDF15Q99988 308 aa18.93■□□□□ 0.62
HDAC6-224ENST00000481929 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
HDAC6-224ENST00000481929 STXBP5LQ9Y2K9 1186 aa18.93■□□□□ 0.62
HDAC6-224ENST00000481929 MGAMO43451 1857 aa18.92■□□□□ 0.62
HDAC6-224ENST00000481929 FLT3LGP49771 235 aa18.92■□□□□ 0.62
HDAC6-224ENST00000481929 FBXO33Q7Z6M2 555 aa18.92■□□□□ 0.62
HDAC6-224ENST00000481929 PXYLP1Q8TE99 480 aa18.92■□□□□ 0.62
HDAC6-224ENST00000481929 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
HDAC6-224ENST00000481929 ZNF112Q9UJU3 913 aa18.92■□□□□ 0.62
HDAC6-224ENST00000481929 CAVIN4Q5BKX8 364 aa18.91■□□□□ 0.62
HDAC6-224ENST00000481929 NOL9Q5SY16 702 aaKnown RBP18.91■□□□□ 0.62
HDAC6-224ENST00000481929 BEND3Q5T5X7 828 aa18.91■□□□□ 0.62
HDAC6-224ENST00000481929 Q7L0L9 218 aa18.91■□□□□ 0.62
HDAC6-224ENST00000481929 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
HDAC6-224ENST00000481929 FAM151AQ8WW52 585 aa18.91■□□□□ 0.62
HDAC6-224ENST00000481929 PAK6Q9NQU5 681 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-224ENST00000481929 GRM8O00222 908 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 CXCL11O14625 94 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 TNPO2O14787 897 aaKnown RBP18.9■□□□□ 0.62
HDAC6-224ENST00000481929 IRF5Q13568 498 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 GPAT2Q6NUI2 795 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 C7orf61Q8IZ16 206 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 PUS3Q9BZE2 481 aaKnown RBP18.9■□□□□ 0.62
HDAC6-224ENST00000481929 SUGT1Q9Y2Z0 365 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 MROH5Q6ZUA9 1318 aa18.9■□□□□ 0.62
HDAC6-224ENST00000481929 F6X3S4 739 aa18.89■□□□□ 0.61
HDAC6-224ENST00000481929 DDX10Q13206 875 aaKnown RBP18.89■□□□□ 0.61
HDAC6-224ENST00000481929 LRIT3Q3SXY7 679 aa18.89■□□□□ 0.61
HDAC6-224ENST00000481929 HHIPL2Q6UWX4 724 aa18.89■□□□□ 0.61
HDAC6-224ENST00000481929 CRISPLD2Q9H0B8 497 aa18.89■□□□□ 0.61
HDAC6-224ENST00000481929 ZMYND8Q9ULU4 1186 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-224ENST00000481929 ALPK3Q96L96 1907 aa18.89■□□□□ 0.61
HDAC6-224ENST00000481929 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
HDAC6-224ENST00000481929 BCAMP50895 628 aa18.88■□□□□ 0.61
HDAC6-224ENST00000481929 FASTKD5Q7L8L6 764 aaKnown RBP18.88■□□□□ 0.61
HDAC6-224ENST00000481929 C9orf78Q9NZ63 289 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-224ENST00000481929 TAOK2Q9UL54 1235 aa18.88■□□□□ 0.61
HDAC6-224ENST00000481929 TCP10Q12799 353 aa18.87■□□□□ 0.61
HDAC6-224ENST00000481929 DIS3LQ8TF46 1054 aaKnown RBP18.87■□□□□ 0.61
HDAC6-224ENST00000481929 COL25A1Q9BXS0 654 aaPredicted RBP18.87■□□□□ 0.61
HDAC6-224ENST00000481929 MTMR10Q9NXD2 777 aa18.87■□□□□ 0.61
HDAC6-224ENST00000481929 GADL1Q6ZQY3 521 aa18.86■□□□□ 0.61
HDAC6-224ENST00000481929 ANKLE1Q8NAG6 615 aa18.86■□□□□ 0.61
HDAC6-224ENST00000481929 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDAC6-224ENST00000481929 AK9Q5TCS8 1911 aa18.86■□□□□ 0.61
HDAC6-224ENST00000481929 A0A0G2JLL6 359 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-224ENST00000481929 CCDC27Q2M243 656 aa18.85■□□□□ 0.61
HDAC6-224ENST00000481929 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
HDAC6-224ENST00000481929 PRRT2Q7Z6L0 340 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-224ENST00000481929 TDHQ8IZJ6 230 aa18.85■□□□□ 0.61
HDAC6-224ENST00000481929 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-224ENST00000481929 COA7Q96BR5 231 aa18.85■□□□□ 0.61
HDAC6-224ENST00000481929 SLC45A1Q9Y2W3 748 aa18.85■□□□□ 0.61
HDAC6-224ENST00000481929 IL16Q14005 1332 aa18.84■□□□□ 0.61
HDAC6-224ENST00000481929 MAGEA10P43363 369 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-224ENST00000481929 WWC1Q8IX03 1113 aa18.84■□□□□ 0.61
HDAC6-224ENST00000481929 PICK1Q9NRD5 415 aa18.84■□□□□ 0.61
HDAC6-224ENST00000481929 ZHX2Q9Y6X8 837 aa18.84■□□□□ 0.61
HDAC6-224ENST00000481929 SYN1P17600 705 aa18.83■□□□□ 0.6
HDAC6-224ENST00000481929 NFIAQ12857 509 aa18.83■□□□□ 0.6
HDAC6-224ENST00000481929 SUCLG2Q96I99 432 aa18.83■□□□□ 0.6
HDAC6-224ENST00000481929 NBPF3Q9H094 633 aa18.83■□□□□ 0.6
HDAC6-224ENST00000481929 ALDH1L1O75891 902 aa18.82■□□□□ 0.6
HDAC6-224ENST00000481929 PDE8BO95263 885 aa18.82■□□□□ 0.6
HDAC6-224ENST00000481929 CDC42EP5Q6NZY7 148 aa18.82■□□□□ 0.6
HDAC6-224ENST00000481929 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC6-224ENST00000481929 SCYL3Q8IZE3 742 aa18.82■□□□□ 0.6
HDAC6-224ENST00000481929 UBE2OQ9C0C9 1292 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms