RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FSHRP23945 695 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 POTEAQ6S8J7 498 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 GPRASP2Q96D09 838 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 KLRG1Q96E93 195 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 CDK15Q96Q40 435 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 OSBPL3Q9H4L5 887 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 COL4A1P02462 1669 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 NDUFB5O43674 189 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 IBSPP21815 317 aaPredicted RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 RAB33AQ14088 237 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 UBE4AQ14139 1066 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 CCDC184Q52MB2 194 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 BRDTQ58F21 947 aaPredicted RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 RC3H1Q5TC82 1133 aaKnown RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 TMC1Q8TDI8 760 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 DNAJC7Q99615 494 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 ADAMTS1Q9UHI8 967 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 CDV3Q9UKY7 258 aaKnown RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 USP31Q70CQ4 1352 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 HSPA2P54652 639 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 ARID5BQ14865 1188 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 SH3PXD2AQ5TCZ1 1133 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 EHBP1Q8NDI1 1231 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 DEPDC7Q96QD5 511 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 ENAMQ9NRM1 1142 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 NR3C2P08235 984 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 GNL2Q13823 731 aaKnown RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 NFE2L2Q16236 605 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 ZFYVE27Q5T4F4 411 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 ANKS3Q6ZW76 656 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 FAM9BQ8IZU0 186 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 ZNF784Q8NCA9 323 aaPredicted RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 ZCRB1Q8TBF4 217 aaKnown RBP4.43□□□□□ -1.7
SMC6-208ENST00000481708 MRFAP1L1Q96HT8 127 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 DMRTB1Q96MA1 342 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 GGT7Q9UJ14 662 aa4.43□□□□□ -1.7
SMC6-208ENST00000481708 SMG6Q86US8 1419 aaKnown RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 USP19O94966 1318 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 FGD1P98174 961 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 SYCP2LQ5T4T6 812 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 KANK3Q6NY19 840 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 C8orf48Q96LL4 319 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 METP08581 1390 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 EP400Q96L91 3159 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 KCNQ2O43526 872 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 LILRA1O75019 489 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 BDNFP23560 247 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 RPIAP49247 311 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 BIRC2Q13490 618 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 FAM43BQ6ZT52 329 aaPredicted RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 SCG3Q8WXD2 468 aaKnown RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 KBTBD4Q9NVX7 518 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 EIF3JO75822 258 aaKnown RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 NFE2Q16621 373 aaPredicted RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 EPS8L3Q8TE67 593 aaKnown RBP4.42□□□□□ -1.7
SMC6-208ENST00000481708 TMEM260Q9NX78 707 aa4.42□□□□□ -1.7
SMC6-208ENST00000481708 NSD2O96028 1365 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 ANKRD30AQ9BXX3 1397 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 KDM6AO15550 1401 aaPredicted RBP4.41□□□□□ -1.7
SMC6-208ENST00000481708 ANKRD36CQ5JPF3 1778 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 PRPF3O43395 683 aaKnown RBP4.41□□□□□ -1.7
SMC6-208ENST00000481708 CDC45O75419 566 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 C16orf46Q6P387 395 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 HS2ST1Q7LGA3 356 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 EAF1Q96JC9 268 aaPredicted RBP4.41□□□□□ -1.7
SMC6-208ENST00000481708 ANKRD31Q8N7Z5 1873 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 ARAP2Q8WZ64 1704 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 PRC1O43663 620 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 ADD1P35611 737 aaKnown RBP4.41□□□□□ -1.7
SMC6-208ENST00000481708 MKL1Q969V6 931 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 ETNK1Q9HBU6 452 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 GPRASP1Q5JY77 1395 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 IGFBP4P22692 258 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 ANKLE2Q86XL3 938 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 MRGPRX2Q96LB1 330 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 CITED4Q96RK1 184 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 GINM1Q9NU53 330 aa4.41□□□□□ -1.7
SMC6-208ENST00000481708 ROBO2Q9HCK4 1378 aa4.4□□□□□ -1.7
SMC6-208ENST00000481708 EIF1AYO14602 144 aaKnown RBP4.4□□□□□ -1.7
SMC6-208ENST00000481708 UBA5Q9GZZ9 404 aa4.4□□□□□ -1.7
SMC6-208ENST00000481708 GGNBP2Q9H3C7 697 aa4.4□□□□□ -1.7
SMC6-208ENST00000481708 ATAD2Q6PL18 1390 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 M0R2N6 131 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 TOM1O60784 492 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 ADH1CP00326 375 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 NOS2P35228 1153 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 NASPP49321 788 aaPredicted RBP4.4□□□□□ -1.71
SMC6-208ENST00000481708 LONRF3Q496Y0 759 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.4□□□□□ -1.71
SMC6-208ENST00000481708 PPP1R26Q5T8A7 1209 aaPredicted RBP4.4□□□□□ -1.71
SMC6-208ENST00000481708 STIM2Q9P246 746 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 CPSF1Q10570 1443 aaKnown RBP4.4□□□□□ -1.71
SMC6-208ENST00000481708 WASLO00401 505 aaPredicted RBP4.4□□□□□ -1.71
SMC6-208ENST00000481708 RGS20O76081 388 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 MYCP01106 439 aaPredicted RBP4.4□□□□□ -1.71
SMC6-208ENST00000481708 GGCXP38435 758 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 CRKP46108 304 aa4.4□□□□□ -1.71
SMC6-208ENST00000481708 CEBPAP49715 358 aaPredicted RBP4.4□□□□□ -1.71
SMC6-208ENST00000481708 GDF10P55107 478 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms