RNA–Protein interactions for RNA: ENST00000481570.5

COL1A2-208, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 5,993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-208ENST00000481570 DDX39AO00148 427 aaKnown RBP12.88□□□□□ -0.35
COL1A2-208ENST00000481570 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
COL1A2-208ENST00000481570 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
COL1A2-208ENST00000481570 IQUBQ8NA54 791 aa12.88□□□□□ -0.35
COL1A2-208ENST00000481570 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 MRPS9P82933 396 aaKnown RBP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 KIF5AQ12840 1032 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 MAPK8IP1Q9UQF2 711 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 ADAMTS12P58397 1594 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 KRT5P13647 590 aa12.87□□□□□ -0.35
COL1A2-208ENST00000481570 GIGYF2Q6Y7W6 1299 aaKnown RBP12.87□□□□□ -0.35
COL1A2-208ENST00000481570 EDC4Q6P2E9 1401 aaKnown RBP12.86□□□□□ -0.35
COL1A2-208ENST00000481570 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 KRT83P78385 493 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 MCM6Q14566 821 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 TICAM2Q86XR7 235 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 SMIM23A6NLE4 172 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 FERP16591 822 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 TXKP42681 527 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 USH1GQ495M9 461 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-208ENST00000481570 H0YIN7 160 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 ZNF569Q5MCW4 686 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 MAPKAPK5Q8IW41 473 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 TRAF5O00463 557 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
COL1A2-208ENST00000481570 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
COL1A2-208ENST00000481570 COL17A1Q9UMD9 1497 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-208ENST00000481570 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 ZAP70P43403 619 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 PPP1R9BQ96SB3 815 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 DEXIO95424 95 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 CCDC65Q8IXS2 484 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 APPBP2Q92624 585 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 CEP63Q96MT8 703 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 IQCGQ9H095 443 aaKnown RBP12.85□□□□□ -0.35
COL1A2-208ENST00000481570 KRT86O43790 486 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 PDE4DQ08499 809 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 BIRC3Q13489 604 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 TGFBRAP1Q8WUH2 860 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 USP21Q9UK80 565 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 PRPHP41219 470 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 NCAPH2Q6IBW4 605 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 FAM173BQ6P4H8 233 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 ELP1O95163 1332 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 SPECC1LQ69YQ0 1117 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 PHKBQ93100 1093 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL1A2-208ENST00000481570 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
COL1A2-208ENST00000481570 GCKRQ14397 625 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 CCDC63Q8NA47 563 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-208ENST00000481570 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 ZNF532Q9HCE3 1301 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-208ENST00000481570 APBA3O96018 575 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 CPXCR1Q8N123 301 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 IFT81Q8WYA0 676 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 TMEM87BQ96K49 555 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 MAST1Q9Y2H9 1570 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 CHL1O00533 1208 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 LPIN2Q92539 896 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
COL1A2-208ENST00000481570 ERCC3P19447 782 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 TAF12Q16514 161 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 LRRC45Q96CN5 670 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 INTS4Q96HW7 963 aaKnown RBP12.84□□□□□ -0.35
COL1A2-208ENST00000481570 VPS16Q9H269 839 aa12.84□□□□□ -0.35
COL1A2-208ENST00000481570 PRIMPOLQ96LW4 560 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 LUC7L2Q9Y383 392 aaKnown RBP12.83□□□□□ -0.36
COL1A2-208ENST00000481570 KCNQ3O43525 872 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 SYT10Q6XYQ8 523 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 CCDC114Q96M63 670 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 FNBP1Q96RU3 617 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 SELENOSQ9BQE4 189 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 RHOXF2Q9BQY4 288 aa12.83□□□□□ -0.36
COL1A2-208ENST00000481570 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms