RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 PPIL2Q13356 520 aa12□□□□□ -0.49
SMARCE1-210ENST00000481231 FKBP5Q13451 457 aaPredicted RBP12□□□□□ -0.49
SMARCE1-210ENST00000481231 LINS1Q8NG48 757 aa12□□□□□ -0.49
SMARCE1-210ENST00000481231 UBE2OQ9C0C9 1292 aaKnown RBP12□□□□□ -0.49
SMARCE1-210ENST00000481231 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
SMARCE1-210ENST00000481231 ARAP2Q8WZ64 1704 aa12□□□□□ -0.49
SMARCE1-210ENST00000481231 CACNB3P54284 484 aa11.99□□□□□ -0.49
SMARCE1-210ENST00000481231 FCGRTP55899 365 aa11.99□□□□□ -0.49
SMARCE1-210ENST00000481231 NECAB2Q7Z6G3 386 aa11.99□□□□□ -0.49
SMARCE1-210ENST00000481231 ANKRD23Q86SG2 305 aa11.99□□□□□ -0.49
SMARCE1-210ENST00000481231 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-210ENST00000481231 PAK6Q9NQU5 681 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-210ENST00000481231 MYH3P11055 1940 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 VAMP4O75379 141 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 CYP2C8P10632 490 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 IL1R1P14778 569 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 FLT3LGP49771 235 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 ZNF804AQ7Z570 1209 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 CRISPLD2Q9H0B8 497 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 MUC3AQ02505 3323 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 PRUNE2Q8WUY3 3088 aa11.98□□□□□ -0.49
SMARCE1-210ENST00000481231 LAMA2P24043 3122 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 ANKRD18BA2A2Z9 1011 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 F6X3S4 739 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 BCRP11274 1271 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 TNNI2P48788 182 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 FOXO4P98177 505 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 MOGSQ13724 837 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 C15orf52Q6ZUT6 534 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
SMARCE1-210ENST00000481231 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 INPP5BP32019 993 aa11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 MFSD14BQ5SR56 506 aa11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 BEND3Q5T5X7 828 aa11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 CHMP3Q9Y3E7 222 aa11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-210ENST00000481231 TTC28Q96AY4 2481 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 CRKP46108 304 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 PPATQ06203 517 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 GRIK5Q16478 980 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 PARK7Q99497 189 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
SMARCE1-210ENST00000481231 FAM205AQ6ZU69 1335 aa11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 TNPO2O14787 897 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 LMBR1LQ6UX01 489 aa11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 KCNH4Q9UQ05 1017 aa11.94□□□□□ -0.5
SMARCE1-210ENST00000481231 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 GRM8O00222 908 aa11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 FAM109BQ6ICB4 259 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 GPAT2Q6NUI2 795 aa11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 CDX2Q99626 313 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 C11orf49Q9H6J7 331 aa11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 COL2A1P02458 1487 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-210ENST00000481231 PFASO15067 1338 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 DDX60LQ5H9U9 1706 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 PLIN1O60240 522 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 IRF5Q13568 498 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 CCDC57Q2TAC2 916 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 TAF7LQ5H9L4 462 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 CNNM1Q9NRU3 951 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 A0A1B0GUL6 1792 aa11.92□□□□□ -0.5
SMARCE1-210ENST00000481231 MGAMO43451 1857 aa11.91□□□□□ -0.5
SMARCE1-210ENST00000481231 CAPN2P17655 700 aa11.91□□□□□ -0.5
SMARCE1-210ENST00000481231 TRIM32Q13049 653 aa11.91□□□□□ -0.5
SMARCE1-210ENST00000481231 ZNF341Q9BYN7 854 aa11.91□□□□□ -0.5
SMARCE1-210ENST00000481231 PLA2G5P39877 138 aa11.9□□□□□ -0.5
SMARCE1-210ENST00000481231 GYG1P46976 350 aa11.9□□□□□ -0.5
SMARCE1-210ENST00000481231 DCAF15Q66K64 600 aa11.9□□□□□ -0.5
SMARCE1-210ENST00000481231 TDRD7Q8NHU6 1098 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-210ENST00000481231 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-210ENST00000481231 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 SLC4A10Q6U841 1118 aa11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 MYLIPQ8WY64 445 aa11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 HOOK2Q96ED9 719 aa11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 KAZALD1Q96I82 304 aa11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 TMOD2Q9NZR1 351 aa11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 RPAP1Q9BWH6 1393 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-210ENST00000481231 ANP32CO43423 234 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms