RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
LSM5-210ENST00000480956 PJA1Q8NG27 643 aa10□□□□□ -0.81
LSM5-210ENST00000480956 SLC26A8Q96RN1 970 aa10□□□□□ -0.81
LSM5-210ENST00000480956 SUV39H2Q9H5I1 410 aa10□□□□□ -0.81
LSM5-210ENST00000480956 ERVH48-1M5A8F1 160 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 EML1O00423 815 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 PHACTR2O75167 634 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 RAPGEF3O95398 923 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 DGKGP49619 791 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 HIRAP54198 1017 aaPredicted RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 C3orf58Q8NDZ4 430 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 WDR66Q8TBY9 1149 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 KCTD15Q96SI1 283 aaPredicted RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 HERPUD2Q9BSE4 406 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 SELENOOQ9BVL4 669 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 SARGQ9BW04 601 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 FAM153BP0C7A2 387 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 SRGNP10124 158 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 GEMIN4P57678 1058 aaKnown RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 ESCO1Q5FWF5 840 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 DDX46Q7L014 1031 aaKnown RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 ZNF354CQ86Y25 554 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 CCDC24Q8N4L8 307 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 SCLT1Q96NL6 688 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 TARS2Q9BW92 718 aaKnown RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 C1QTNF2Q9BXJ5 285 aa9.99□□□□□ -0.81
LSM5-210ENST00000480956 CCDC8Q9H0W5 538 aaPredicted RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 FCF1Q9Y324 198 aaKnown RBP9.99□□□□□ -0.81
LSM5-210ENST00000480956 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 PRRT4C9JH25 899 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 MCM4P33991 863 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 HALP42357 657 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 LMNB2Q03252 620 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 LONRF2Q1L5Z9 754 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 CCDC184Q52MB2 194 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 FAM196AQ6ZSG2 479 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 STRA8Q7Z7C7 330 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 JPH3Q8WXH2 748 aaPredicted RBP9.98□□□□□ -0.81
LSM5-210ENST00000480956 TIFAQ96CG3 184 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 FBXO2Q9UK22 296 aaPredicted RBP9.98□□□□□ -0.81
LSM5-210ENST00000480956 ZNF232Q9UNY5 417 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
LSM5-210ENST00000480956 POLR3DP05423 398 aaPredicted RBP9.97□□□□□ -0.81
LSM5-210ENST00000480956 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
LSM5-210ENST00000480956 LIG3P49916 1009 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 SH3PXD2AQ5TCZ1 1133 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 ZNF438Q7Z4V0 828 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 TRMT44Q8IYL2 757 aaKnown RBP9.97□□□□□ -0.81
LSM5-210ENST00000480956 ANKLE1Q8NAG6 615 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 NGDNQ8NEJ9 315 aaKnown RBP9.97□□□□□ -0.81
LSM5-210ENST00000480956 VPS37AQ8NEZ2 397 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 ANKRD24Q8TF21 1146 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 BAP1Q92560 729 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
LSM5-210ENST00000480956 PPM1HQ9ULR3 514 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 MAP4K5Q9Y4K4 846 aa9.97□□□□□ -0.81
LSM5-210ENST00000480956 DNAJC25-GNG10A0A024R161 153 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 B2RBV5 119 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 SARSP49591 514 aaKnown RBP9.96□□□□□ -0.81
LSM5-210ENST00000480956 CASP7P55210 303 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 TCIRG1Q13488 830 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 ZC3H12BQ5HYM0 836 aaKnown RBP9.96□□□□□ -0.81
LSM5-210ENST00000480956 RNF219Q5W0B1 726 aaPredicted RBP9.96□□□□□ -0.81
LSM5-210ENST00000480956 CXorf57Q6NSI4 855 aaKnown RBP9.96□□□□□ -0.81
LSM5-210ENST00000480956 XKR5Q6UX68 686 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 LIAT1Q6ZQX7 453 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 SV2BQ7L1I2 683 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 PPHLN1Q8NEY8 458 aaKnown RBP9.96□□□□□ -0.81
LSM5-210ENST00000480956 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.81
LSM5-210ENST00000480956 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 FBRSQ9HAH7 460 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 RABGAP1Q9Y3P9 1069 aa9.96□□□□□ -0.81
LSM5-210ENST00000480956 ROBO2Q9HCK4 1378 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 MICAL2O94851 1124 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 EPB42P16452 691 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.82
LSM5-210ENST00000480956 CNNM4Q6P4Q7 775 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 C6orf15Q6UXA7 325 aaPredicted RBP9.96□□□□□ -0.82
LSM5-210ENST00000480956 CREBRFQ8IUR6 639 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 GPR101Q96P66 508 aaPredicted RBP9.96□□□□□ -0.82
LSM5-210ENST00000480956 KIF2CQ99661 725 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 RHOBTB2Q9BYZ6 727 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 USP3Q9Y6I4 520 aa9.96□□□□□ -0.82
LSM5-210ENST00000480956 STRN3Q13033 797 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 CCDC93Q567U6 631 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 INTS6LQ5JSJ4 861 aaKnown RBP9.95□□□□□ -0.82
LSM5-210ENST00000480956 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 GALNT12Q8IXK2 581 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 ZNF511Q8NB15 262 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 TRIM52Q96A61 297 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 SPATA9Q9BWV2 254 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 POLG2Q9UHN1 485 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 ASAP1Q9ULH1 1129 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 NOL7Q9UMY1 257 aaKnown RBP9.95□□□□□ -0.82
LSM5-210ENST00000480956 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms