RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 POLD1P28340 1107 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 MARCKSP29966 332 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 SH3BGRP55822 239 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 GEN1Q17RS7 908 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 MAPK8IP2Q13387 824 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 IFT20Q8IY31 132 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 LLPHQ9BRT6 129 aaKnown RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 PLCB1Q9NQ66 1216 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 ANKRD12Q6UB98 2062 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 AOX1Q06278 1338 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 CEP57Q86XR8 500 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 WDR7Q9Y4E6 1490 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 A0A1B0GUA9 196 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 LDHBP07195 334 aaKnown RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 SLC9C2Q5TAH2 1124 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 SV2BQ7L1I2 683 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 RNF216Q9NWF9 866 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 AGTPBP1Q9UPW5 1226 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 NUP58Q9BVL2 599 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 PDE1AP54750 535 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 SARNPP82979 210 aaKnown RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 XAGE3Q8WTP9 111 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 NCAPGQ9BPX3 1015 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 RNF113AO15541 343 aaKnown RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 CPSF2Q9P2I0 782 aaKnown RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 MAP1BP46821 2468 aaKnown RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 HSPA1LP34931 641 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 GABPB1Q06547 395 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 CCDC122Q5T0U0 273 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 FNBP1Q96RU3 617 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 OGFRQ9NZT2 677 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 ZKSCAN5Q9Y2L8 839 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 SPOPO43791 374 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 YWHAEP62258 255 aaKnown RBP10.67□□□□□ -0.7
VEGFA-212ENST00000480614 CUL4BQ13620 913 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 PPP2R5EQ16537 467 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 ISM2Q6H9L7 571 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 CHPF2Q9P2E5 772 aa10.67□□□□□ -0.7
VEGFA-212ENST00000480614 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-212ENST00000480614 VCX3AQ9NNX9 186 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GUCA1BQ9UMX6 200 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GOLGA6CA6NDK9 693 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GOLGA6BA6NDN3 693 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GOLGA6DP0CG33 693 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GSDMBQ8TAX9 411 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GOLGA6AQ9NYA3 693 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 TACC3Q9Y6A5 838 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 EMILIN1Q9Y6C2 1016 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 GBP6Q6ZN66 633 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 TRMT1LQ7Z2T5 733 aaKnown RBP10.66□□□□□ -0.7
VEGFA-212ENST00000480614 JDP2Q8WYK2 163 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 ATP8B2P98198 1209 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 RUFY4Q6ZNE9 571 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 ZNF219Q9P2Y4 722 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-212ENST00000480614 TTC6Q86TZ1 520 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 MCM9Q9NXL9 1143 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 FAM160A1Q05DH4 1040 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 BIRC3Q13489 604 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 ANKRD44Q8N8A2 993 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 UBLCP1Q8WVY7 318 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-212ENST00000480614 ZNF569Q5MCW4 686 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 TNRQ92752 1358 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 MAGEB6Q8N7X4 407 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 PPP1R9BQ96SB3 815 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 FEZ2Q9UHY8 353 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-212ENST00000480614 CYP26C1Q6V0L0 522 aa10.66□□□□□ -0.7
VEGFA-212ENST00000480614 TTF2Q9UNY4 1162 aaKnown RBP10.66□□□□□ -0.7
VEGFA-212ENST00000480614 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 DPH6Q7L8W6 267 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 RASSF4Q9H2L5 321 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 TRAF5O00463 557 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 PICK1Q9NRD5 415 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 PLB1Q6P1J6 1458 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 MAP3K21Q5TCX8 1036 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 MAST3O60307 1309 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 ZEB2O60315 1214 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 P4HA1P13674 534 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 TNFAIP3P21580 790 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 NSMCE1Q8WV22 266 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 DACT1Q9NYF0 836 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 FLOT1O75955 427 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 KRT5P13647 590 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 HACE1Q8IYU2 909 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 ATP2A3Q93084 1043 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 VEZTQ9HBM0 779 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 VPS18Q9P253 973 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 NEDD9Q14511 834 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 FCHSD1Q86WN1 690 aa10.65□□□□□ -0.7
VEGFA-212ENST00000480614 NUCKS1Q9H1E3 243 aaKnown RBP10.65□□□□□ -0.7
VEGFA-212ENST00000480614 TRPM2O94759 1503 aa10.65□□□□□ -0.71
VEGFA-212ENST00000480614 PPP2R5BQ15173 497 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms