RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 RNF20Q5VTR2 975 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 HHIPL2Q6UWX4 724 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 RASEFQ8IZ41 740 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 IFNL3Q8IZI9 196 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 KCNB2Q92953 911 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 TEKT1Q969V4 418 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 GMLQ99445 158 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 CRNKL1Q9BZJ0 848 aaKnown RBP20.99■□□□□ 0.95
UPF3A-206ENST00000480362 ZBTB12Q9Y330 459 aaPredicted RBP20.99■□□□□ 0.95
UPF3A-206ENST00000480362 SNX14Q9Y5W7 946 aa20.99■□□□□ 0.95
UPF3A-206ENST00000480362 RPAP1Q9BWH6 1393 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-206ENST00000480362 CRKP46108 304 aa20.98■□□□□ 0.95
UPF3A-206ENST00000480362 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
UPF3A-206ENST00000480362 ALX1Q15699 326 aa20.98■□□□□ 0.95
UPF3A-206ENST00000480362 CERS3Q8IU89 383 aa20.98■□□□□ 0.95
UPF3A-206ENST00000480362 AGBL3Q8NEM8 1001 aa20.98■□□□□ 0.95
UPF3A-206ENST00000480362 SH3RF3Q8TEJ3 882 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-206ENST00000480362 ZKSCAN1P17029 563 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-206ENST00000480362 SDR42E1Q8WUS8 393 aa20.97■□□□□ 0.95
UPF3A-206ENST00000480362 NACAP1Q9BZK3 213 aa20.97■□□□□ 0.95
UPF3A-206ENST00000480362 EPB41L4AQ9HCS5 686 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-206ENST00000480362 IL17RAQ96F46 866 aa20.96■□□□□ 0.95
UPF3A-206ENST00000480362 NAPBQ9H115 298 aa20.96■□□□□ 0.95
UPF3A-206ENST00000480362 SERPINA10Q9UK55 444 aa20.96■□□□□ 0.95
UPF3A-206ENST00000480362 SBF1O95248 1867 aa20.96■□□□□ 0.95
UPF3A-206ENST00000480362 CYP21A2P08686 494 aa20.95■□□□□ 0.94
UPF3A-206ENST00000480362 PLCG2P16885 1265 aa20.95■□□□□ 0.94
UPF3A-206ENST00000480362 ANP32AP39687 249 aaKnown RBP20.95■□□□□ 0.94
UPF3A-206ENST00000480362 TDO2P48775 406 aa20.95■□□□□ 0.94
UPF3A-206ENST00000480362 RBM5P52756 815 aaKnown RBP eCLIP20.95■□□□□ 0.94
UPF3A-206ENST00000480362 ZDHHC15Q96MV8 337 aa20.95■□□□□ 0.94
UPF3A-206ENST00000480362 ZMYM6O95789 1325 aa20.95■□□□□ 0.94
UPF3A-206ENST00000480362 ZNF213O14771 459 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 RHBDL3P58872 404 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 IMMTQ16891 758 aaKnown RBP20.94■□□□□ 0.94
UPF3A-206ENST00000480362 TSGA10IPQ3SY00 556 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 APOBEC3HQ6NTF7 200 aaKnown RBP20.94■□□□□ 0.94
UPF3A-206ENST00000480362 GIMAP6Q6P9H5 292 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 ATP8A2Q9NTI2 1148 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 HDAC9Q9UKV0 1011 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 PCDHAC2Q9Y5I4 1007 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 GJA3Q9Y6H8 435 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 TAF6LQ9Y6J9 622 aa20.94■□□□□ 0.94
UPF3A-206ENST00000480362 DICER1Q9UPY3 1922 aaKnown RBP20.94■□□□□ 0.94
UPF3A-206ENST00000480362 USP17L8P0C7I0 530 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 USP5P45974 858 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 HAND2P61296 217 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 RABEP1Q15276 862 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 CFAP100Q494V2 611 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 TEX11Q8IYF3 940 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 OGFOD1Q8N543 542 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 TGFBRAP1Q8WUH2 860 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 USP40Q9NVE5 1235 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 ZNF541Q9H0D2 1346 aa20.93■□□□□ 0.94
UPF3A-206ENST00000480362 ADAMTSL1Q8N6G6 1762 aa20.92■□□□□ 0.94
UPF3A-206ENST00000480362 GRIN3BO60391 1043 aa20.92■□□□□ 0.94
UPF3A-206ENST00000480362 RPS12P25398 132 aaKnown RBP20.92■□□□□ 0.94
UPF3A-206ENST00000480362 ADCK5Q3MIX3 580 aa20.92■□□□□ 0.94
UPF3A-206ENST00000480362 C9orf131Q5VYM1 1079 aa20.92■□□□□ 0.94
UPF3A-206ENST00000480362 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
UPF3A-206ENST00000480362 DCP1AQ9NPI6 582 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-206ENST00000480362 KRT32Q14532 448 aa20.91■□□□□ 0.94
UPF3A-206ENST00000480362 CDC42EP5Q6NZY7 148 aa20.91■□□□□ 0.94
UPF3A-206ENST00000480362 JAKMIP1Q96N16 626 aaKnown RBP20.91■□□□□ 0.94
UPF3A-206ENST00000480362 MKRN1Q9UHC7 482 aaKnown RBP20.91■□□□□ 0.94
UPF3A-206ENST00000480362 GMPSP49915 693 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-206ENST00000480362 MAPKAPK5Q8IW41 473 aa20.9■□□□□ 0.94
UPF3A-206ENST00000480362 TM6SF1Q9BZW5 370 aa20.9■□□□□ 0.94
UPF3A-206ENST00000480362 MINDY4BA8MYZ0 360 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 USP17L12C9JPN9 530 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 USP17L21D6R901 530 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 E7EWF7 191 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 PSMA5P28066 241 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 DLGAP5Q15398 846 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 CTR9Q6PD62 1173 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 STOX1Q6ZVD7 989 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 DPF2Q92785 391 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 PRMT6Q96LA8 375 aaPredicted RBP20.89■□□□□ 0.93
UPF3A-206ENST00000480362 MCM9Q9NXL9 1143 aa20.89■□□□□ 0.93
UPF3A-206ENST00000480362 SHTN1A0MZ66 631 aa20.88■□□□□ 0.93
UPF3A-206ENST00000480362 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
UPF3A-206ENST00000480362 MMP14P50281 582 aa20.88■□□□□ 0.93
UPF3A-206ENST00000480362 CTDSPL2Q05D32 466 aa20.88■□□□□ 0.93
UPF3A-206ENST00000480362 NEK1Q96PY6 1258 aa20.88■□□□□ 0.93
UPF3A-206ENST00000480362 NBPF3Q9H094 633 aa20.88■□□□□ 0.93
UPF3A-206ENST00000480362 TDRD3Q9H7E2 651 aaKnown RBP20.88■□□□□ 0.93
UPF3A-206ENST00000480362 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
UPF3A-206ENST00000480362 BAZ2AQ9UIF9 1905 aaKnown RBP20.87■□□□□ 0.93
UPF3A-206ENST00000480362 CYP2D7A0A087X1C5 515 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 WDHD1O75717 1129 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-206ENST00000480362 NEK4P51957 841 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 ZNF280AP59817 542 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-206ENST00000480362 PPARAQ07869 468 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 SBK1Q52WX2 424 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 GPC2Q8N158 579 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 MTMR14Q8NCE2 650 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 UPF3BQ9BZI7 483 aaKnown RBP20.87■□□□□ 0.93
UPF3A-206ENST00000480362 ARPP21Q9UBL0 812 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-206ENST00000480362 CNOT7Q9UIV1 285 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms