RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-206	ENST00000479994	DNAJC2	Q99543	621 aa	Known RBP	13.93	□□□□□ -0.18
HCLS1-206	ENST00000479994	HMG20B	Q9P0W2	317 aa		13.93	□□□□□ -0.18
HCLS1-206	ENST00000479994	ZNRF3	Q9ULT6	936 aa		13.93	□□□□□ -0.18
HCLS1-206	ENST00000479994	POLR2A	P24928	1970 aa	Known RBP	13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	MYH2	Q9UKX2	1941 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	ECE2	O60344	883 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	MFAP1	P55081	439 aa	Known RBP	13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	GSTO1	P78417	241 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	TNIP1	Q15025	636 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	AOC3	Q16853	763 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	CHRDL2	Q6WN34	429 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	RILPL2	Q969X0	211 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	FSD1	Q9BTV5	496 aa		13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	RBM27	Q9P2N5	1060 aa	Known RBP	13.92	□□□□□ -0.18
HCLS1-206	ENST00000479994	SCN9A	Q15858	1988 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	USP17L3	A6NCW0	530 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	USP17L4	A6NCW7	530 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	SNAP23	O00161	211 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	GOLIM4	O00461	696 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	CDC45	O75419	566 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	TBC1D8	O95759	1140 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	SLC10A3	P09131	477 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	EN2	P19622	333 aa	Predicted RBP	13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	SDS	P20132	328 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	HIRA	P54198	1017 aa	Predicted RBP	13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	ERICH6	Q7L0X2	663 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	USP17L1	Q7RTZ2	530 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	TXNRD3	Q86VQ6	643 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	LRP2BP	Q9P2M1	347 aa		13.91	□□□□□ -0.18
HCLS1-206	ENST00000479994	GSPT1	P15170	499 aa	Known RBP	13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	KLRK1	P26718	216 aa		13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	ZAP70	P43403	619 aa		13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	TTLL5	Q6EMB2	1281 aa		13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	USP48	Q86UV5	1035 aa		13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	ZC3H15	Q8WU90	426 aa	Known RBP	13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	GBA2	Q9HCG7	927 aa	Predicted RBP	13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	DIAPH3	Q9NSV4	1193 aa		13.9	□□□□□ -0.18
HCLS1-206	ENST00000479994	RAD50	Q92878	1312 aa		13.9	□□□□□ -0.19
HCLS1-206	ENST00000479994	CYP2E1	P05181	493 aa	Predicted RBP	13.89	□□□□□ -0.19
HCLS1-206	ENST00000479994	LDHB	P07195	334 aa	Known RBP	13.89	□□□□□ -0.19
HCLS1-206	ENST00000479994	LDHC	P07864	332 aa		13.89	□□□□□ -0.19
HCLS1-206	ENST00000479994	RPS12	P25398	132 aa	Known RBP	13.89	□□□□□ -0.19
HCLS1-206	ENST00000479994	TSHZ3	Q63HK5	1081 aa		13.89	□□□□□ -0.19
HCLS1-206	ENST00000479994	ECM29	Q5VYK3	1845 aa		13.89	□□□□□ -0.19
HCLS1-206	ENST00000479994	MAP4K4	O95819	1239 aa	Predicted RBP	13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	HDLBP	Q00341	1268 aa	Known RBP	13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	CHAF1A	Q13111	956 aa	Predicted RBP	13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	SCARF1	Q14162	830 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	UBE3C	Q15386	1083 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	DOK7	Q18PE1	504 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	MFSD14B	Q5SR56	506 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	DZIP1	Q86YF9	867 aa	Known RBP	13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	REM2	Q8IYK8	340 aa	Predicted RBP	13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	C2orf69	Q8N8R5	385 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	AGBL3	Q8NEM8	1001 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	NOL10	Q9BSC4	688 aa	Known RBP	13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	MRI	Q9BWK5	157 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	DBNDD1	Q9H9R9	158 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	ABCF2	Q9UG63	623 aa		13.88	□□□□□ -0.19
HCLS1-206	ENST00000479994	WTIP	A6NIX2	430 aa	Predicted RBP	13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	GPR25	O00155	361 aa		13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	RNF113A	O15541	343 aa	Known RBP	13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	EPB41L2	O43491	1005 aa	Known RBP	13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	IDH1	O75874	414 aa	Known RBP	13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	GTF2I	P78347	998 aa		13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	SNRK	Q9NRH2	765 aa		13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	HELLS	Q9NRZ9	838 aa		13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	RAI14	Q9P0K7	980 aa		13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	COL1A1	P02452	1464 aa	Predicted RBP	13.87	□□□□□ -0.19
HCLS1-206	ENST00000479994	REC8	O95072	547 aa		13.86	□□□□□ -0.19
HCLS1-206	ENST00000479994	VIL1	P09327	827 aa	Known RBP	13.86	□□□□□ -0.19
HCLS1-206	ENST00000479994	NOM1	Q5C9Z4	860 aa	Known RBP	13.86	□□□□□ -0.19
HCLS1-206	ENST00000479994	SLC9C2	Q5TAH2	1124 aa		13.86	□□□□□ -0.19
HCLS1-206	ENST00000479994	OGFOD1	Q8N543	542 aa		13.86	□□□□□ -0.19
HCLS1-206	ENST00000479994	FBXW7	Q969H0	707 aa		13.86	□□□□□ -0.19
HCLS1-206	ENST00000479994	FOCAD	Q5VW36	1801 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	BAG3	O95817	575 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	PLCG2	P16885	1265 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	ADD2	P35612	726 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	GMPS	P49915	693 aa	Predicted RBP	13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	DACT2	Q5SW24	774 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	NAA16	Q6N069	864 aa	Predicted RBP	13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	TRPM4	Q8TD43	1214 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	APPBP2	Q92624	585 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	UPF2	Q9HAU5	1272 aa	Known RBP	13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	PRDM6	Q9NQX0	595 aa		13.85	□□□□□ -0.19
HCLS1-206	ENST00000479994	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	VCAN	P13611	3396 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	GNAT2	P19087	354 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	CHML	P26374	656 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	PI16	Q6UXB8	463 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	KIAA1211	Q6ZU35	1233 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	DPF2	Q92785	391 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	FAM163A	Q96GL9	167 aa	Predicted RBP	13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	PIH1D3	Q9NQM4	214 aa	Known RBP	13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	SERPINA10	Q9UK55	444 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	LAMA3	Q16787	3333 aa		13.84	□□□□□ -0.19
HCLS1-206	ENST00000479994	FKTN	O75072	461 aa		13.83	□□□□□ -0.2

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