RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TM6SF1Q9BZW5 370 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 PNMA2Q9UL42 364 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 VPS37CA5D8V6 355 aaPredicted RBP6.9□□□□□ -1.3
CPS1-207ENST00000479988 MBD4O95243 580 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 CELF2O95319 508 aaKnown RBP6.9□□□□□ -1.3
CPS1-207ENST00000479988 TPM2P07951 284 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 EPHX2P34913 555 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 KIAA2012Q0VF49 1180 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 CAVIN1Q6NZI2 390 aaKnown RBP6.9□□□□□ -1.3
CPS1-207ENST00000479988 TMTC2Q8N394 836 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 UPF3BQ9BZI7 483 aaKnown RBP6.9□□□□□ -1.3
CPS1-207ENST00000479988 RRAGCQ9HB90 399 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 ATP10DQ9P241 1426 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 CASTP20810 708 aaKnown RBP6.9□□□□□ -1.3
CPS1-207ENST00000479988 SREBF2Q12772 1141 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 CFAP100Q494V2 611 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 HOMER1Q86YM7 354 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 ROBO1Q9Y6N7 1651 aa6.9□□□□□ -1.3
CPS1-207ENST00000479988 USP14P54578 494 aa6.9□□□□□ -1.31
CPS1-207ENST00000479988 TNNI3KQ59H18 835 aa6.9□□□□□ -1.31
CPS1-207ENST00000479988 FPGT-TNNI3KV9GXZ4 949 aa6.9□□□□□ -1.31
CPS1-207ENST00000479988 SETD1AO15047 1707 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 CAMTA2O94983 1202 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 HSPA4P34932 840 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 IFIT1BQ5T764 474 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 NCOA7Q8NI08 942 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 SMARCC2Q8TAQ2 1214 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 TGFBRAP1Q8WUH2 860 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 COA7Q96BR5 231 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 NBPF3Q9H094 633 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 BMP2KQ9NSY1 1161 aaPredicted RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 RNF113AO15541 343 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 TRIM21P19474 475 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 BTDP43251 543 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 HAND2P61296 217 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 KRT85P78386 507 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 DPP9Q86TI2 863 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 KLHDC4Q8TBB5 520 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 NOC3LQ8WTT2 800 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 CEP89Q96ST8 783 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 ZNF341Q9BYN7 854 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 ADARB2Q9NS39 739 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 GMPSP49915 693 aaPredicted RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 CAMKK2Q96RR4 588 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 SAMM50Q9Y512 469 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 PES1O00541 588 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 SASH1O94885 1247 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 WTAPQ15007 396 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 LARP1BQ659C4 914 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 CHURC1Q8WUH1 139 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 RAB34Q9BZG1 259 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 DHX36Q9H2U1 1008 aaKnown RBP6.89□□□□□ -1.31
CPS1-207ENST00000479988 COPRSQ9NQ92 184 aa6.89□□□□□ -1.31
CPS1-207ENST00000479988 MYCP01106 439 aaPredicted RBP6.88□□□□□ -1.31
CPS1-207ENST00000479988 KCTD2Q14681 263 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 TSHZ3Q63HK5 1081 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 CPXCR1Q8N123 301 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 DBNDD2Q9BQY9 259 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 DNAI2Q9GZS0 605 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 CCDC194A0A1B0GVG4 234 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 GOLGA8AA7E2F4 631 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 GOLGA8BA8MQT2 603 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 CA8P35219 290 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 SLC1A4P43007 532 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 MATR3P43243 847 aaKnown RBP eCLIP6.88□□□□□ -1.31
CPS1-207ENST00000479988 ZNF827Q17R98 1081 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 CERKLQ49MI3 558 aaPredicted RBP6.88□□□□□ -1.31
CPS1-207ENST00000479988 MCMDC2Q4G0Z9 681 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 TTLL11Q8NHH1 800 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 CELF1Q92879 486 aaKnown RBP6.88□□□□□ -1.31
CPS1-207ENST00000479988 SPDYE3A6NKU9 549 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 SSBP05455 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
CPS1-207ENST00000479988 HMGN5P82970 282 aaKnown RBP6.88□□□□□ -1.31
CPS1-207ENST00000479988 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
CPS1-207ENST00000479988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.88□□□□□ -1.31
CPS1-207ENST00000479988 SCAND2PQ9GZW5 306 aaPredicted RBP6.88□□□□□ -1.31
CPS1-207ENST00000479988 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 ZHX3Q9H4I2 956 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 GGA3Q9NZ52 723 aa6.88□□□□□ -1.31
CPS1-207ENST00000479988 ATRNO75882 1429 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 TPM3P06753 285 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 TAF1CQ15572 869 aaPredicted RBP6.87□□□□□ -1.31
CPS1-207ENST00000479988 CCDC171Q6TFL3 1326 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 NSMFQ6X4W1 530 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CLEC17AQ6ZS10 378 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CCDC17Q96LX7 622 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 WRNIP1Q96S55 665 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CD209Q9NNX6 404 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 GPR108Q9NPR9 543 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 RBM8AQ9Y5S9 174 aaKnown RBP6.87□□□□□ -1.31
CPS1-207ENST00000479988 CDHR2Q9BYE9 1310 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 STX6O43752 255 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 ATP5JP18859 108 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CFAP45Q9UL16 551 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CIAO1O76071 339 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 NLRP5P59047 1200 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms