RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PLCG2P16885 1265 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 BTDP43251 543 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 CFAP100Q494V2 611 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
TRAPPC12-218ENST00000479897 AIDAQ96BJ3 306 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 SEC62Q99442 399 aaKnown RBP15.08■□□□□ 0
TRAPPC12-218ENST00000479897 NOL10Q9BSC4 688 aaKnown RBP15.08■□□□□ 0
TRAPPC12-218ENST00000479897 IL25Q9H293 177 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 MYOZ2Q9NPC6 264 aa15.08■□□□□ 0
TRAPPC12-218ENST00000479897 CNOT7Q9UIV1 285 aaKnown RBP15.08■□□□□ 0
TRAPPC12-218ENST00000479897 RPAP1Q9BWH6 1393 aaPredicted RBP15.08■□□□□ 0
TRAPPC12-218ENST00000479897 EPB41L2O43491 1005 aaKnown RBP15.07■□□□□ 0
TRAPPC12-218ENST00000479897 MBD4O95243 580 aa15.07■□□□□ 0
TRAPPC12-218ENST00000479897 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-218ENST00000479897 RHBDL3P58872 404 aa15.07■□□□□ 0
TRAPPC12-218ENST00000479897 ZNF589Q86UQ0 364 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-218ENST00000479897 LCORLQ8N3X6 602 aa15.07■□□□□ 0
TRAPPC12-218ENST00000479897 MIGA1Q8NAN2 632 aa15.07■□□□□ 0
TRAPPC12-218ENST00000479897 AATFQ9NY61 560 aaKnown RBP eCLIP15.07■□□□□ 0
TRAPPC12-218ENST00000479897 ZMYM6O95789 1325 aa15.07■□□□□ 0
TRAPPC12-218ENST00000479897 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-218ENST00000479897 MYH1P12882 1939 aa15.06■□□□□ 0
TRAPPC12-218ENST00000479897 SHTN1A0MZ66 631 aa15.06■□□□□ 0
TRAPPC12-218ENST00000479897 IQCA1LA6NCM1 817 aa15.06■□□□□ 0
TRAPPC12-218ENST00000479897 H7C1D1 291 aa15.06■□□□□ 0
TRAPPC12-218ENST00000479897 GNAT2P19087 354 aa15.06■□□□□ 0
TRAPPC12-218ENST00000479897 DLGAP5Q15398 846 aa15.06■□□□□ 0
TRAPPC12-218ENST00000479897 STRBPQ96SI9 672 aaKnown RBP15.06■□□□□ 0
TRAPPC12-218ENST00000479897 ADARB2Q9NS39 739 aaKnown RBP15.06■□□□□ 0
TRAPPC12-218ENST00000479897 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ 0
TRAPPC12-218ENST00000479897 WNT10BO00744 389 aa15.05■□□□□ -0
TRAPPC12-218ENST00000479897 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
TRAPPC12-218ENST00000479897 DYNLL1P63167 89 aaKnown RBP15.05■□□□□ -0
TRAPPC12-218ENST00000479897 KIF4BQ2VIQ3 1234 aa15.05■□□□□ -0
TRAPPC12-218ENST00000479897 DSCC1Q9BVC3 393 aa15.05■□□□□ -0
TRAPPC12-218ENST00000479897 CRNKL1Q9BZJ0 848 aaKnown RBP15.05■□□□□ -0
TRAPPC12-218ENST00000479897 ARMT1Q9H993 441 aa15.05■□□□□ -0
TRAPPC12-218ENST00000479897 HACL1Q9UJ83 578 aa15.05■□□□□ -0
TRAPPC12-218ENST00000479897 FOXP2O15409 715 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 REC8O95072 547 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 EPS15P42566 896 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 RBM5P52756 815 aaKnown RBP eCLIP15.04■□□□□ -0
TRAPPC12-218ENST00000479897 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 FKBP1CQ5VVH2 108 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 GIMAP6Q6P9H5 292 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 PRMT6Q96LA8 375 aaPredicted RBP15.04■□□□□ -0
TRAPPC12-218ENST00000479897 IDI2Q9BXS1 227 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 PCDHAC2Q9Y5I4 1007 aa15.04■□□□□ -0
TRAPPC12-218ENST00000479897 POTECB2RU33 542 aa15.03■□□□□ -0
TRAPPC12-218ENST00000479897 MYO1BO43795 1136 aa15.03■□□□□ -0
TRAPPC12-218ENST00000479897 EGFRP00533 1210 aa15.03■□□□□ -0
TRAPPC12-218ENST00000479897 USP50Q70EL3 339 aaPredicted RBP15.03■□□□□ -0
TRAPPC12-218ENST00000479897 SAMD7Q7Z3H4 446 aa15.03■□□□□ -0
TRAPPC12-218ENST00000479897 TRPM4Q8TD43 1214 aa15.03■□□□□ -0
TRAPPC12-218ENST00000479897 SH3RF3Q8TEJ3 882 aaPredicted RBP15.03■□□□□ -0
TRAPPC12-218ENST00000479897 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
TRAPPC12-218ENST00000479897 MKRN1Q9UHC7 482 aaKnown RBP15.03■□□□□ -0
TRAPPC12-218ENST00000479897 PITPNM2Q9BZ72 1349 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 SIPA1L1O43166 1804 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 GSG1L2A8MUP6 293 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-218ENST00000479897 HSPD1P10809 573 aaKnown RBP15.02■□□□□ -0
TRAPPC12-218ENST00000479897 ALX1Q15699 326 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 TBC1D10BQ4KMP7 808 aaPredicted RBP15.02■□□□□ -0
TRAPPC12-218ENST00000479897 TEX11Q8IYF3 940 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 BACH2Q9BYV9 841 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 USP40Q9NVE5 1235 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 SLC4A4Q9Y6R1 1079 aa15.02■□□□□ -0
TRAPPC12-218ENST00000479897 FLT1P17948 1338 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 PATL2C9JE40 543 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 EPHX2P34913 555 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 NBPF9Q3BBW0 867 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 VPS53Q5VIR6 699 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 KIAA1211Q6ZU35 1233 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 TAF1DQ9H5J8 278 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 TDRD3Q9H7E2 651 aaKnown RBP15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 EPB41L4AQ9HCS5 686 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 DCP1AQ9NPI6 582 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 ANO2Q9NQ90 1003 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 TMOD2Q9NZR1 351 aa15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 ZNF70Q9UC06 446 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC12-218ENST00000479897 ATRNL1Q5VV63 1379 aa15□□□□□ -0.01
TRAPPC12-218ENST00000479897 PRKAB2O43741 272 aa15□□□□□ -0.01
TRAPPC12-218ENST00000479897 ENTPD3O75355 529 aa15□□□□□ -0.01
TRAPPC12-218ENST00000479897 HIRAP54198 1017 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-218ENST00000479897 FAM83AQ86UY5 434 aa15□□□□□ -0.01
TRAPPC12-218ENST00000479897 PNMA8AQ86V59 439 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-218ENST00000479897 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
TRAPPC12-218ENST00000479897 SDR42E1Q8WUS8 393 aa15□□□□□ -0.01
TRAPPC12-218ENST00000479897 NACAP1Q9BZK3 213 aa15□□□□□ -0.01
TRAPPC12-218ENST00000479897 POLR2AP24928 1970 aaKnown RBP15□□□□□ -0.01
TRAPPC12-218ENST00000479897 ROBO3Q96MS0 1386 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 VEGFAP15692 232 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 USP5P45974 858 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 PTH1RQ03431 593 aa14.99□□□□□ -0.01
TRAPPC12-218ENST00000479897 NFIAQ12857 509 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms