RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 EP400NLQ6ZTU2 488 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 PANK2Q9BZ23 570 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 LARGE1O95461 756 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 PRDX5P30044 214 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 SPTY2D1Q68D10 685 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 ADRA2BP18089 450 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 DMTNQ08495 405 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 BAG3O95817 575 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 KDM3BQ7LBC6 1761 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 TSPY2A6NKD2 308 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 JAK2O60674 1132 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
RAPGEF3-209ENST00000479866 FAM84BQ96KN1 310 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 ZSWIM6Q9HCJ5 1215 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 STX8Q9UNK0 236 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 LDHCP07864 332 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 CHRNA5P30532 468 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 XDHP47989 1333 aa13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 COL16A1Q07092 1604 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-209ENST00000479866 PPEF1O14829 653 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 ZNF609O15014 1411 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 SYT1P21579 422 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 SCNN1DP51172 638 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 DBNDD1Q9H9R9 158 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 MPHOSPH10O00566 681 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 ARID4AP29374 1257 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 RAB3GAP1Q15042 981 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 CCDC66A2RUB6 948 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 USP17L12C9JPN9 530 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 USP17L21D6R901 530 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 PDE6BP35913 854 aa13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-209ENST00000479866 UBE3CQ15386 1083 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 ZNF827Q17R98 1081 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 ERICH4A6NGS2 130 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 PIK3R5Q8WYR1 880 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 WTAPQ15007 396 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF3-209ENST00000479866 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 GPSM2P81274 684 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 TEX11Q8IYF3 940 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 TRIM22Q8IYM9 498 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 C8orf76Q96K31 380 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 SLC26A6Q9BXS9 759 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 CNPY2Q9Y2B0 182 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 C5P01031 1676 aa13.34□□□□□ -0.27
RAPGEF3-209ENST00000479866 LOC102724159A0A0B4J2E5 919 aa13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 ZBTB43O43298 467 aa13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 BBOX1O75936 387 aa13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 KRT85P78386 507 aa13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 PWP2Q15269 919 aaKnown RBP13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 TM6SF1Q9BZW5 370 aa13.33□□□□□ -0.27
RAPGEF3-209ENST00000479866 PTPDC1A2A3K4 754 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 GNAT2P19087 354 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 MECOMQ03112 1051 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 FAM47AQ5JRC9 791 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 ESR2Q92731 530 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 DDR1Q08345 913 aa13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-209ENST00000479866 CMTR1Q8N1G2 835 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms