RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SEMA3EO15041 775 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 MYO1BO43795 1136 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 CRKP46108 304 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 IREB2P48200 963 aaKnown RBP10.96□□□□□ -0.65
DDX56-211ENST00000479602 FKBP1CQ5VVH2 108 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 APOBEC3HQ6NTF7 200 aaKnown RBP10.96□□□□□ -0.65
DDX56-211ENST00000479602 TICAM2Q86XR7 235 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 CHMP3Q9Y3E7 222 aa10.96□□□□□ -0.65
DDX56-211ENST00000479602 BCAMP50895 628 aa10.95□□□□□ -0.66
DDX56-211ENST00000479602 MAP3K9P80192 1104 aa10.95□□□□□ -0.66
DDX56-211ENST00000479602 G3BP1Q13283 466 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDX56-211ENST00000479602 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
DDX56-211ENST00000479602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDX56-211ENST00000479602 ZDHHC15Q96MV8 337 aa10.95□□□□□ -0.66
DDX56-211ENST00000479602 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
DDX56-211ENST00000479602 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
DDX56-211ENST00000479602 SUGT1Q9Y2Z0 365 aa10.95□□□□□ -0.66
DDX56-211ENST00000479602 CEP290O15078 2479 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
DDX56-211ENST00000479602 NEFLP07196 543 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 IFIT1P09914 478 aaKnown RBP10.94□□□□□ -0.66
DDX56-211ENST00000479602 CRHR2Q13324 411 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 TNFAIP1Q13829 316 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 METTL24Q5JXM2 366 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 HHIPL2Q6UWX4 724 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 FAM83AQ86UY5 434 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 RHPN1Q8TCX5 695 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.94□□□□□ -0.66
DDX56-211ENST00000479602 TBC1D22AQ8WUA7 517 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 BRI3BPQ8WY22 251 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 TMEM39BQ9GZU3 492 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 VEZTQ9HBM0 779 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
DDX56-211ENST00000479602 PTPN22Q9Y2R2 807 aa10.94□□□□□ -0.66
DDX56-211ENST00000479602 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 SLC5A1P13866 664 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 ATP2B3Q16720 1220 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 KLHDC4Q8TBB5 520 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 ARMC5Q96C12 935 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 LAMB1P07942 1786 aa10.93□□□□□ -0.66
DDX56-211ENST00000479602 MYH13Q9UKX3 1938 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 SALL3Q9BXA9 1300 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 ARID4AP29374 1257 aaPredicted RBP10.92□□□□□ -0.66
DDX56-211ENST00000479602 RBM5P52756 815 aaKnown RBP eCLIP10.92□□□□□ -0.66
DDX56-211ENST00000479602 VGLL4Q14135 290 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 PRPF38BQ5VTL8 546 aaKnown RBP10.92□□□□□ -0.66
DDX56-211ENST00000479602 OPTNQ96CV9 577 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 LRRCC1Q9C099 1032 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 ZNF112Q9UJU3 913 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
DDX56-211ENST00000479602 A0A1B0GUL7 405 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 SPDYE5A6NIY4 337 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 TCP10L2B9ZVM9 353 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 SP3Q02447 781 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 CAVIN4Q5BKX8 364 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 CLASRPQ8N2M8 674 aaKnown RBP10.91□□□□□ -0.66
DDX56-211ENST00000479602 FAM43AQ8N2R8 423 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 ELP3Q9H9T3 547 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 IQSEC3Q9UPP2 1182 aaPredicted RBP10.91□□□□□ -0.66
DDX56-211ENST00000479602 TRIM17Q9Y577 477 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 SNCAIPQ9Y6H5 919 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 RANBP2P49792 3224 aaKnown RBP10.91□□□□□ -0.66
DDX56-211ENST00000479602 DOCK2Q92608 1830 aa10.91□□□□□ -0.66
DDX56-211ENST00000479602 MAST2Q6P0Q8 1798 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 GTF2A2P52657 109 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 MAP3K10Q02779 954 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 TFCP2Q12800 502 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 MOGSQ13724 837 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
DDX56-211ENST00000479602 TEKT1Q969V4 418 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 ERO1AQ96HE7 468 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 SIL1Q9H173 461 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
DDX56-211ENST00000479602 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 EXOC6BQ9Y2D4 811 aa10.9□□□□□ -0.66
DDX56-211ENST00000479602 TTC41PQ6P2S7 1318 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 ECM29Q5VYK3 1845 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 IRF6O14896 467 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 UQCRFS1P1P0C7P4 283 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 TNNI2P48788 182 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 CACNB3P54284 484 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 NUCB1Q02818 461 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 ERO1BQ86YB8 467 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 EAF2Q96CJ1 260 aaPredicted RBP10.89□□□□□ -0.67
DDX56-211ENST00000479602 GNL3LQ9NVN8 582 aaKnown RBP10.89□□□□□ -0.67
DDX56-211ENST00000479602 STAP2Q9UGK3 403 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 DBNLQ9UJU6 430 aaKnown RBP10.89□□□□□ -0.67
DDX56-211ENST00000479602 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
DDX56-211ENST00000479602 RPAP1Q9BWH6 1393 aaPredicted RBP10.89□□□□□ -0.67
DDX56-211ENST00000479602 CCL15-CCL14A0A0B4J2E2 113 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 TLR2O60603 784 aa10.88□□□□□ -0.67
DDX56-211ENST00000479602 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms