RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 PRDM10Q9NQV6 1147 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 ABCF2Q9UG63 623 aa12.96□□□□□ -0.33
SP140-210ENST00000479539 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
SP140-210ENST00000479539 CA12O43570 354 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 HMMRO75330 724 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 USP2O75604 605 aaPredicted RBP12.95□□□□□ -0.34
SP140-210ENST00000479539 HSPA8P11142 646 aaKnown RBP12.95□□□□□ -0.34
SP140-210ENST00000479539 MCAMP43121 646 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 CACNB3P54284 484 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 CDC42EP5Q6NZY7 148 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
SP140-210ENST00000479539 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
SP140-210ENST00000479539 EXOC6BQ9Y2D4 811 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
SP140-210ENST00000479539 POLR2AP24928 1970 aaKnown RBP12.94□□□□□ -0.34
SP140-210ENST00000479539 GAKO14976 1311 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 PI16Q6UXB8 463 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 ERICH6Q7L0X2 663 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 FZD1Q9UP38 647 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
SP140-210ENST00000479539 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
SP140-210ENST00000479539 LBX1P52954 281 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 MECOMQ03112 1051 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 TTC39AQ5SRH9 613 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 DZIP1Q86YF9 867 aaKnown RBP12.93□□□□□ -0.34
SP140-210ENST00000479539 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 FAM151AQ8WW52 585 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 YTHDC1Q96MU7 727 aaKnown RBP12.93□□□□□ -0.34
SP140-210ENST00000479539 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
SP140-210ENST00000479539 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
SP140-210ENST00000479539 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
SP140-210ENST00000479539 PAPPA2Q9BXP8 1791 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 GPR75-ASB3A0A0A6YYF3 556 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 IGSF3O75054 1194 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 NFIAQ12857 509 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 NSUN4Q96CB9 384 aaKnown RBP12.92□□□□□ -0.34
SP140-210ENST00000479539 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 SLC10A4Q96EP9 437 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
SP140-210ENST00000479539 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
SP140-210ENST00000479539 LDHCP07864 332 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 TM4SF4P48230 202 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
SP140-210ENST00000479539 GSTO1P78417 241 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 AACSQ86V21 672 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 SAGE1Q9NXZ1 904 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
SP140-210ENST00000479539 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 BTDP43251 543 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 ZAP70P43403 619 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 RHBDL3P58872 404 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.34
SP140-210ENST00000479539 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
SP140-210ENST00000479539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.34
SP140-210ENST00000479539 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
SP140-210ENST00000479539 RPAP1Q9BWH6 1393 aaPredicted RBP12.9□□□□□ -0.34
SP140-210ENST00000479539 ENTPD3O75355 529 aa12.89□□□□□ -0.35
SP140-210ENST00000479539 WDHD1O75717 1129 aaPredicted RBP12.89□□□□□ -0.35
SP140-210ENST00000479539 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
SP140-210ENST00000479539 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
SP140-210ENST00000479539 TCP10Q12799 353 aa12.89□□□□□ -0.35
SP140-210ENST00000479539 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
SP140-210ENST00000479539 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SP140-210ENST00000479539 TSKSQ9UJT2 592 aa12.89□□□□□ -0.35
SP140-210ENST00000479539 TRPA1O75762 1119 aa12.88□□□□□ -0.35
SP140-210ENST00000479539 GJA5P36382 358 aa12.88□□□□□ -0.35
SP140-210ENST00000479539 INHBEP58166 350 aa12.88□□□□□ -0.35
SP140-210ENST00000479539 SREBF2Q12772 1141 aa12.88□□□□□ -0.35
SP140-210ENST00000479539 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
SP140-210ENST00000479539 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
SP140-210ENST00000479539 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
SP140-210ENST00000479539 PIH1D3Q9NQM4 214 aaKnown RBP12.88□□□□□ -0.35
SP140-210ENST00000479539 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 MANSC4A6NHS7 340 aaPredicted RBP12.87□□□□□ -0.35
SP140-210ENST00000479539 APBB1O00213 710 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 RGS3P49796 1198 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 PPP4CP60510 307 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 VGLL4Q14135 290 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 TNS4Q8IZW8 715 aa12.87□□□□□ -0.35
SP140-210ENST00000479539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms