RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 HOXB4P17483 251 aaPredicted RBP8.57□□□□□ -1.04
HOXB3-209ENST00000478644 SEC13P55735 322 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 PTK7Q13308 1070 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 SH3PXD2AQ5TCZ1 1133 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 PODNQ7Z5L7 613 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 ZNF594Q96JF6 807 aaPredicted RBP8.57□□□□□ -1.04
HOXB3-209ENST00000478644 SYT17Q9BSW7 474 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
HOXB3-209ENST00000478644 DCDC2BA2VCK2 349 aa8.56□□□□□ -1.04
HOXB3-209ENST00000478644 KHNYNO15037 678 aaKnown RBP8.56□□□□□ -1.04
HOXB3-209ENST00000478644 RRS1Q15050 365 aaKnown RBP8.56□□□□□ -1.04
HOXB3-209ENST00000478644 HSP90AB2PQ58FF8 381 aa8.56□□□□□ -1.04
HOXB3-209ENST00000478644 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
HOXB3-209ENST00000478644 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
HOXB3-209ENST00000478644 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
HOXB3-209ENST00000478644 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
HOXB3-209ENST00000478644 CCNL1Q9UK58 526 aaPredicted RBP8.56□□□□□ -1.04
HOXB3-209ENST00000478644 QSER1Q2KHR3 1735 aa8.56□□□□□ -1.04
HOXB3-209ENST00000478644 BTAF1O14981 1849 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 FAM196BA6NMK8 535 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 GRIN3BO60391 1043 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 CD33P20138 364 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 SNRPNP63162 240 aaKnown RBP8.55□□□□□ -1.04
HOXB3-209ENST00000478644 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 BTBD6Q96KE9 485 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 C2orf49Q9BVC5 232 aaPredicted RBP8.55□□□□□ -1.04
HOXB3-209ENST00000478644 C1orf115Q9H7X2 142 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
HOXB3-209ENST00000478644 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
HOXB3-209ENST00000478644 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
HOXB3-209ENST00000478644 IGHA1P01876 353 aa8.54□□□□□ -1.04
HOXB3-209ENST00000478644 ADH6P28332 368 aa8.54□□□□□ -1.04
HOXB3-209ENST00000478644 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
HOXB3-209ENST00000478644 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
HOXB3-209ENST00000478644 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
HOXB3-209ENST00000478644 PAPPAQ13219 1627 aa8.54□□□□□ -1.04
HOXB3-209ENST00000478644 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
HOXB3-209ENST00000478644 KAT6BQ8WYB5 2073 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 NEURL1BA8MQ27 555 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 ERVV-2B6SEH9 535 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 LRRC69Q6ZNQ3 347 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 ALYREFQ86V81 257 aaKnown RBP8.53□□□□□ -1.04
HOXB3-209ENST00000478644 DCAF5Q96JK2 942 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 MDFIQ99750 246 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 PHACTR1Q9C0D0 580 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 VRTNQ9H8Y1 702 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 KNSTRNQ9Y448 316 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 LY75O60449 1722 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 MEGF6O75095 1541 aa8.53□□□□□ -1.04
HOXB3-209ENST00000478644 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
HOXB3-209ENST00000478644 PPP1R12BO60237 982 aaPredicted RBP8.52□□□□□ -1.05
HOXB3-209ENST00000478644 KCNQ4P56696 695 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 ZNF827Q17R98 1081 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 PLEKHO1Q53GL0 409 aaPredicted RBP8.52□□□□□ -1.05
HOXB3-209ENST00000478644 MPRIPQ6WCQ1 1025 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 RHPN1Q8TCX5 695 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 POLKQ9UBT6 870 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 HCN4Q9Y3Q4 1203 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 CD2APQ9Y5K6 639 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L10C9JJH3 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L12C9JPN9 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L21D6R901 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 FBLN1P23142 703 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 SSFA2P28290 1259 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
HOXB3-209ENST00000478644 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 DPYDQ12882 1025 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 GPR162Q16538 588 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 FCHSD1Q86WN1 690 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 ANKMY2Q8IV38 441 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 TMOD3Q9NYL9 352 aa8.51□□□□□ -1.05
HOXB3-209ENST00000478644 PALLDQ8WX93 1383 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 CYP27B1O15528 508 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 DGKGP49619 791 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 MORC1Q86VD1 984 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 ALDH16A1Q8IZ83 802 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 SCG3Q8WXD2 468 aaKnown RBP8.5□□□□□ -1.05
HOXB3-209ENST00000478644 PDGFDQ9GZP0 370 aaPredicted RBP8.5□□□□□ -1.05
HOXB3-209ENST00000478644 PANK3Q9H999 370 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 ANKRD26Q9UPS8 1709 aa8.5□□□□□ -1.05
HOXB3-209ENST00000478644 COL24A1Q17RW2 1714 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 DOT1LQ8TEK3 1739 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 SIN3BO75182 1162 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 PHKG2P15735 406 aa8.49□□□□□ -1.05
HOXB3-209ENST00000478644 IGFBP4P22692 258 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms